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  1. Bugs That Are No Longer Relevant
  2. OLD-60

Activating Single-Track Operation on depth track throws exception

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None

      Description

      Windows v12291

      A_thal
      Rt click > Transform < Depth
      Click on track label
      Track Operations > Single-Track Operations > Any option > Go

      Exception thrown:

      Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
      at com.affymetrix.igb.view.TrackView.getTier(TrackView.java:84)
      at com.affymetrix.igb.view.TrackView.getTrack(TrackView.java:97)
      at com.affymetrix.igb.view.SeqMapView.getTrack(SeqMapView.java:942)
      at com.affymetrix.igb.view.SeqMapView.getTrack(SeqMapView.java:938)
      at com.affymetrix.igb.view.TrackView.addAnnotationGlyphs(TrackView.java:244)
      at com.affymetrix.igb.view.TrackView.addTracks(TrackView.java:154)
      at com.affymetrix.igb.view.SeqMapView.addAnnotationTracks(SeqMapView.java:1255)
      at com.affymetrix.igb.view.SeqMapView.addGlyphs(SeqMapView.java:1001)
      at com.affymetrix.igb.view.SeqMapView.setAnnotatedSeq(SeqMapView.java:815)
      at com.affymetrix.igb.view.SeqMapView.setAnnotatedSeq(SeqMapView.java:737)
      at com.affymetrix.igb.shared.TrackUtils.addTrack(TrackUtils.java:39)
      at com.affymetrix.igb.shared.TrackFunctionOperationA.addNonUpdateableTier(TrackFunctionOperationA.java:109)
      at com.affymetrix.igb.shared.TrackFunctionOperationA.addTier(TrackFunctionOperationA.java:48)
      at com.affymetrix.igb.shared.TrackTransformAction.actionPerformed(TrackTransformAction.java:24)
      at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
      at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
      at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
      at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
      at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(Unknown Source)
      at java.awt.AWTEventMulticaster.mouseReleased(Unknown Source)
      at java.awt.Component.processMouseEvent(Unknown Source)
      at javax.swing.JComponent.processMouseEvent(Unknown Source)
      at java.awt.Component.processEvent(Unknown Source)
      at java.awt.Container.processEvent(Unknown Source)
      at java.awt.Component.dispatchEventImpl(Unknown Source)
      at java.awt.Container.dispatchEventImpl(Unknown Source)
      at java.awt.Component.dispatchEvent(Unknown Source)
      at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
      at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
      at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
      at java.awt.Container.dispatchEventImpl(Unknown Source)
      at java.awt.Window.dispatchEventImpl(Unknown Source)
      at java.awt.Component.dispatchEvent(Unknown Source)
      at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
      at java.awt.EventQueue.access$000(Unknown Source)
      at java.awt.EventQueue$1.run(Unknown Source)
      at java.awt.EventQueue$1.run(Unknown Source)
      at java.security.AccessController.doPrivileged(Native Method)
      at java.security.AccessControlContext$1.doIntersectionPrivilege(Unknown Source)
      at java.security.AccessControlContext$1.doIntersectionPrivilege(Unknown Source)
      at java.awt.EventQueue$2.run(Unknown Source)
      at java.awt.EventQueue$2.run(Unknown Source)
      at java.security.AccessController.doPrivileged(Native Method)
      at java.security.AccessControlContext$1.doIntersectionPrivilege(Unknown Source)
      at java.awt.EventQueue.dispatchEvent(Unknown Source)
      at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
      at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
      at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
      at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
      at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
      at java.awt.EventDispatchThread.run(Unknown Source)

        Attachments

          Activity

          kkubiak Katharine Kubiak (Inactive) created issue -
          kkubiak Katharine Kubiak (Inactive) made changes -
          Field Original Value New Value
          Assignee Hiral Vora [ hiralv ]
          hiralv Hiral Vora (Inactive) made changes -
          Assignee Hiral Vora [ hiralv ] Katharine Kubiak [ kkubiak ]
          kkubiak Katharine Kubiak (Inactive) made changes -
          Attachment black.PNG [ 11117 ]
          kkubiak Katharine Kubiak (Inactive) made changes -
          Assignee Katharine Kubiak [ kkubiak ] Hiral Vora [ hiralv ]
          hiralv Hiral Vora (Inactive) made changes -
          Assignee Hiral Vora [ hiralv ] Katharine Kubiak [ kkubiak ]
          kkubiak Katharine Kubiak (Inactive) made changes -
          Status Open [ 1 ] Resolved [ 5 ]
          Assignee Katharine Kubiak [ kkubiak ]
          Resolution Fixed [ 1 ]
          kkubiak Katharine Kubiak (Inactive) made changes -
          Status Resolved [ 5 ] Closed [ 6 ]
          kkubiak Katharine Kubiak (Inactive) made changes -
          Project IGB 7.0 [ 10140 ] Bug Repository [ 10030 ]
          Key IGBC-423 BUG-528
          alyssa Alyssa Gulledge (Inactive) made changes -
          Resolution Fixed [ 1 ]
          Status Closed [ 6 ] Reopened [ 4 ]
          alyssa Alyssa Gulledge (Inactive) made changes -
          Link This issue is blocked by BUG-639 [ BUG-639 ]
          alyssa Alyssa Gulledge (Inactive) made changes -
          Project Bug Repository [ 10030 ] Bugs That Are No Longer Relevant [ 10041 ]
          Key BUG-528 OLD-60
          Reporter Katharine Kubiak [ kkubiak ] Alyssa Gulledge [ alyssa ]
          alyssa Alyssa Gulledge (Inactive) made changes -
          Link This issue is blocked by BUG-639 [ BUG-639 ]
          hiralv Hiral Vora (Inactive) made changes -
          Status Reopened [ 4 ] Closed [ 6 ]
          Resolution Fixed [ 1 ]

            People

            • Assignee:
              Unassigned
              Reporter:
              alyssa Alyssa Gulledge (Inactive)
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              Watchers:
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              Dates

              • Created:
                Updated:
                Resolved: