Details
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Type:
Task
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Status: Open (View Workflow)
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Priority:
Minor
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Resolution: Unresolved
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
Description
Across servers:
- What happens when you have two sites w/ the same directory name (corresponding to a genome version) but different human-readable titles/names for that same genome version/directory? TOP PRIORITY to test
- What happens if you have two sites w/ the same human-readable name associated with the two different genome version directory names?
Naming errors:
-Replace tabs with spaces - IGB should report an error on the console but should not bug the user with a dialog.
-Replace underscore with space - IGB would probably accept this but other things would break, such as the matching of genome versions across sites.
-Duplicate a line - Ideally, nothing bad should happen. Check to see if the the same genome version appears twice in the Current Genome genome version menu.
-Duplicate a line change col1
-Duplicate a line change col2
Notes:
_____What it is____
This file is required by IGB.
The file is tab-delimited.
This file associates a human readable title with a directory.
Question: Which column is the human readable title and which column is the directory name?
For example, see: Control:Normal file found at http://www.igbquickload.org/quickload/contents.txt
_____Expectations____
Format
where col1= Title and col2=directory.
This file also allows the user to have other folders on the Quickload site but have IGB ignore them by not listing them specifically here.
Names:
Directories are expected to be in the format of (First letter of the genus, capitalized) (species, all lower case) (3 letters, typically the code for the month, first letter capitalized) (4 digits, the year).
For example, A_thaliana_Jun_2009 is theTAIR10 genome released June 2008.
Attachments
Activity
| Priority | Major [ 3 ] | Minor [ 4 ] |
| Description |
______What it is_____ This file is required by IGB This file will associate a Human readable title with a directory in a tab delimited file. ______Expectations_____ Format where col1= Title and col2=directory. This file also allows the user to have other folders on the quick server but have IGB ignore them by not listing them specifically here. Names: Directories are expected to be in the format of (First letter of the genus, capitalized) (species, all lower case) (3 letters, typically the code for the month, first letter capitalized) (4 digits, the year). For example, A_thaliana_Jun_2009 is theTAIR10 genome released June 2008. _____Tests_____ Control:Normal file found at http://www.igbquickload.org/quickload/contents.txt Naming errors: -Replace tabs with spaces -Reverse Title and Directory -Replace underscore with space -Alternate capitalization in list -Alternate capitalization in file names -Duplicate a line -Duplicate a line change col1 -Duplicate a line change col2 Across servers: -Create name collision on titles across servers -Create file name collision across servers -Name collision on both columns (Title and file name) but different data |
Across servers: - What happens when you have two sites w/ the same directory name (corresponding to a genome version) but different human-readable titles/names for that same genome version/directory? TOP PRIORITY to test - What happens if you have two sites w/ the same human-readable name associated with the two different genome version directory names? Naming errors: -Replace tabs with spaces - IGB should report an error on the console but should not bug the user with a dialog. -Replace underscore with space - IGB would probably accept this but other things would break, such as the matching of genome versions across sites. -Duplicate a line - Ideally, nothing bad should happen. Check to see if the the same genome version appears twice in the Current Genome genome version menu. -Duplicate a line change col1 -Duplicate a line change col2 Notes: ______What it is_____ This file is required by IGB. The file is tab-delimited. This file associates a human readable title with a directory. Question: Which column is the human readable title and which column is the directory name? For example, see: Control:Normal file found at http://www.igbquickload.org/quickload/contents.txt ______Expectations_____ Format where col1= Title and col2=directory. This file also allows the user to have other folders on the Quickload site but have IGB ignore them by not listing them specifically here. Names: Directories are expected to be in the format of (First letter of the genus, capitalized) (species, all lower case) (3 letters, typically the code for the month, first letter capitalized) (4 digits, the year). For example, A_thaliana_Jun_2009 is theTAIR10 genome released June 2008. |
| Assignee | Kyle Suttlemyre [ kyle ] |
Note: you can test using your local Apache on your laptop OR folders