# # A fatal error has been detected by the Java Runtime Environment: # # SIGSEGV (0xb) at pc=0x00000001319bf4cc, pid=13497, tid=59399 # # JRE version: Java(TM) SE Runtime Environment (8.0_25-b17) (build 1.8.0_25-b17) # Java VM: Java HotSpot(TM) 64-Bit Server VM (25.25-b02 mixed mode bsd-amd64 compressed oops) # Problematic frame: # C [libawt_lwawt.dylib+0x1b4cc] OGLSD_SetScratchSurface+0x33 # # Failed to write core dump. Core dumps have been disabled. To enable core dumping, try "ulimit -c unlimited" before starting Java again # # If you would like to submit a bug report, please visit: # http://bugreport.sun.com/bugreport/crash.jsp # The crash happened outside the Java Virtual Machine in native code. # See problematic frame for where to report the bug. # --------------- T H R E A D --------------- Current thread (0x0000000102c18800): JavaThread "Java2D Queue Flusher" daemon [_thread_in_native, id=59399, stack(0x0000000132ef0000,0x0000000132ff0000)] siginfo: si_signo: 11 (SIGSEGV), si_code: 1 (SEGV_MAPERR), si_addr: 0x0000000000000000 Registers: RAX=0x00000000ffffffff, RBX=0x0000000102c189e8, RCX=0x0000000000000047, RDX=0x00000001319dfad0 RSP=0x0000000132fef7d0, RBP=0x0000000132fef7f0, RSI=0x0000608000633900, RDI=0x0000000102c189e8 R8 =0x00000005c00155a0, R9 =0x0000000000000000, R10=0x0000000106e453f8, R11=0x0000000000000040 R12=0x0000000000000000, R13=0x00000005c00155a0, R14=0x0000000000000000, R15=0x0000000102c18800 RIP=0x00000001319bf4cc, EFLAGS=0x0000000000010206, ERR=0x0000000000000004 TRAPNO=0x000000000000000e Top of Stack: (sp=0x0000000132fef7d0) 0x0000000132fef7d0: 0000608000633900 0000000000000000 0x0000000132fef7e0: 0000000102c1c810 0000000102c18800 0x0000000132fef7f0: 0000000132fef870 00000001319df5ae 0x0000000132fef800: 0000000000000064 00006180001c21d8 0x0000000132fef810: 0000000132fef870 00000001054a5f53 0x0000000132fef820: 0000000000000005 0000000102c18800 0x0000000132fef830: 00000005c0015501 0000000102c1c840 0x0000000132fef840: 0000000100fef800 0000000102c189e8 0x0000000132fef850: 0000000000000000 0000000000000000 0x0000000132fef860: 0000000132fef8c8 0000000102c18800 0x0000000132fef870: 0000000132fef8c0 0000000106e4546a 0x0000000132fef880: 00000005c0021598 0000000132fef8b0 0x0000000132fef890: 00000001288bd8d0 0000000000000000 0x0000000132fef8a0: 0000000000000001 00000001068f0ed8 0x0000000132fef8b0: 0000000132fef8d0 0000000000000246 0x0000000132fef8c0: 00000000b80042b3 000000010899c1c0 0x0000000132fef8d0: 0000000000000010 00000005c0021598 0x0000000132fef8e0: 00000005c00155a0 0000000000000000 0x0000000132fef8f0: 0000000000000007 00000005c00155a0 0x0000000132fef900: 0000000716b8a650 0000000745311410 0x0000000132fef910: b8855baeb8855b9b 00000001b8855bae 0x0000000132fef920: 00000005c42add70 0000000000000000 0x0000000132fef930: 0000000000000001 0000000000000011 0x0000000132fef940: 0000000000000000 0000000000000000 0x0000000132fef950: 0000000132fef9d0 00000001061994e7 0x0000000132fef960: 00000005c00155a0 00000005c00155e8 0x0000000132fef970: 0000000100001fa0 000000000000000a 0x0000000132fef980: 0000000102c18800 0000000000000001 0x0000000132fef990: 000000010619945f 0000000132c85258 0x0000000132fef9a0: 0000000132fefa68 0000000132fefd00 0x0000000132fef9b0: 000000010000000a 0000000132c85258 0x0000000132fef9c0: 00000001061a9de0 0000000132fefc70 Instructions: (pc=0x00000001319bf4cc) 0x00000001319bf4ac: 00 00 48 8d 15 40 72 03 00 30 c0 be 01 00 00 00 0x00000001319bf4bc: e8 1b 9b 02 00 31 c0 eb 6d 48 89 fb 4c 8b 76 10 0x00000001319bf4cc: 4d 8b 3e 30 c0 e8 f8 9f 02 00 49 8b 3f 49 89 c4 0x00000001319bf4dc: 48 8b 35 3d f0 05 00 30 c0 e8 1c a1 02 00 48 85 Register to memory mapping: RAX=0x00000000ffffffff is an unknown value RBX=0x0000000102c189e8 is an unknown value RCX=0x0000000000000047 is an unknown value RDX=0x00000001319dfad0: Java_sun_java2d_opengl_OGLRenderQueue_flushBuffer+0xb5c in /Applications/Integrated Genome Browser/.install4j/jre.bundle/Contents/Home/jre/lib/libawt_lwawt.dylib at 0x00000001319a4000 RSP=0x0000000132fef7d0 is pointing into the stack for thread: 0x0000000102c18800 RBP=0x0000000132fef7f0 is pointing into the stack for thread: 0x0000000102c18800 RSI=0x0000608000633900 is an unknown value RDI=0x0000000102c189e8 is an unknown value R8 =0x00000005c00155a0 is an oop sun.java2d.opengl.OGLRenderQueue$QueueFlusher - klass: 'sun/java2d/opengl/OGLRenderQueue$QueueFlusher' R9 =0x0000000000000000 is an unknown value R10=0x0000000106e453f8 is at entry_point+56 in (nmethod*)0x0000000106e45250 R11=0x0000000000000040 is an unknown value R12=0x0000000000000000 is an unknown value R13=0x00000005c00155a0 is an oop sun.java2d.opengl.OGLRenderQueue$QueueFlusher - klass: 'sun/java2d/opengl/OGLRenderQueue$QueueFlusher' R14=0x0000000000000000 is an unknown value R15=0x0000000102c18800 is a thread Stack: [0x0000000132ef0000,0x0000000132ff0000], sp=0x0000000132fef7d0, free space=1021k Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code) C [libawt_lwawt.dylib+0x1b4cc] OGLSD_SetScratchSurface+0x33 C [libawt_lwawt.dylib+0x3b5ae] Java_sun_java2d_opengl_OGLRenderQueue_flushBuffer+0x63a J 4641 sun.java2d.opengl.OGLRenderQueue.flushBuffer(JI)V (0 bytes) @ 0x0000000106e4546a [0x0000000106e453c0+0xaa] J 14533% C2 sun.java2d.opengl.OGLRenderQueue$QueueFlusher.run()V (234 bytes) @ 0x000000010899c1c0 [0x000000010899bf80+0x240] Java frames: (J=compiled Java code, j=interpreted, Vv=VM code) J 4641 sun.java2d.opengl.OGLRenderQueue.flushBuffer(JI)V (0 bytes) @ 0x0000000106e453f8 [0x0000000106e453c0+0x38] J 14533% C2 sun.java2d.opengl.OGLRenderQueue$QueueFlusher.run()V (234 bytes) @ 0x000000010899c1c0 [0x000000010899bf80+0x240] v ~StubRoutines::call_stub --------------- P R O C E S S --------------- Java Threads: ( => current thread ) 0x0000000101829800 JavaThread "pool-113-thread-8" [_thread_in_Java, id=86859, stack(0x0000000149e66000,0x0000000149f66000)] 0x0000000101881000 JavaThread "pool-113-thread-7" [_thread_in_Java, id=123299, stack(0x0000000149d63000,0x0000000149e63000)] 0x000000010182e000 JavaThread "pool-113-thread-6" [_thread_in_Java, id=118679, stack(0x00000001492ef000,0x00000001493ef000)] 0x0000000100acd000 JavaThread "pool-113-thread-4" [_thread_in_Java, id=95523, stack(0x00000001490e9000,0x00000001491e9000)] 0x0000000100efb800 JavaThread "pool-113-thread-2" [_thread_in_Java, id=111867, stack(0x0000000148ba7000,0x0000000148ca7000)] 0x0000000148099800 JavaThread "Image Fetcher 0" daemon [_thread_blocked, id=110163, stack(0x0000000144d96000,0x0000000144e96000)] 0x0000000100e2c800 JavaThread "pool-112-thread-1" [_thread_blocked, id=126683, stack(0x0000000144ec3000,0x0000000144fc3000)] 0x0000000102dea000 JavaThread "pool-94-thread-1" [_thread_blocked, id=88691, stack(0x000000014495c000,0x0000000144a5c000)] 0x00000001599d4800 JavaThread "pool-78-thread-1" [_thread_blocked, id=94971, stack(0x0000000143001000,0x0000000143101000)] 0x0000000136824800 JavaThread "pool-77-thread-1" [_thread_blocked, id=97931, stack(0x00000001422c9000,0x00000001423c9000)] 0x0000000100bb2800 JavaThread "pool-57-thread-1" [_thread_blocked, id=87735, stack(0x00000001420c1000,0x00000001421c1000)] 0x0000000102bea000 JavaThread "pool-53-thread-1" [_thread_blocked, id=97591, stack(0x0000000140a46000,0x0000000140b46000)] 0x0000000102847000 JavaThread "pool-49-thread-1" [_thread_blocked, id=85347, stack(0x000000013cc01000,0x000000013cd01000)] 0x0000000103009000 JavaThread "pool-45-thread-1" [_thread_blocked, id=89699, stack(0x000000012c960000,0x000000012ca60000)] 0x0000000102dc6800 JavaThread "pool-35-thread-1" [_thread_blocked, id=91815, stack(0x000000013cd45000,0x000000013ce45000)] 0x00000001480a4800 JavaThread "pool-27-thread-1" [_thread_blocked, id=75515, stack(0x000000013d567000,0x000000013d667000)] 0x0000000100a26800 JavaThread "pool-21-thread-1" [_thread_blocked, id=62667, stack(0x000000013c1ae000,0x000000013c2ae000)] 0x0000000100bcd800 JavaThread "pool-17-thread-1" [_thread_blocked, id=65943, stack(0x000000013bb78000,0x000000013bc78000)] 0x00000001369af000 JavaThread "pool-14-thread-1" [_thread_blocked, id=78427, stack(0x0000000140605000,0x0000000140705000)] 0x0000000100abd800 JavaThread "pool-12-thread-1" [_thread_blocked, id=76183, stack(0x000000014eedc000,0x000000014efdc000)] 0x0000000136af6000 JavaThread "pool-11-thread-1" [_thread_blocked, id=68011, stack(0x000000013a5d3000,0x000000013a6d3000)] 0x0000000100ee9800 JavaThread "pool-9-thread-1" [_thread_blocked, id=80235, stack(0x000000015895d000,0x0000000158a5d000)] 0x0000000136825000 JavaThread "pool-8-thread-1" [_thread_blocked, id=80455, stack(0x0000000145eb7000,0x0000000145fb7000)] 0x0000000102b98800 JavaThread "DestroyJavaVM" [_thread_blocked, id=12291, stack(0x0000000106097000,0x0000000106197000)] 0x0000000136900800 JavaThread "pool-7-thread-1" [_thread_blocked, id=71475, stack(0x000000013a9f8000,0x000000013aaf8000)] 0x0000000103017800 JavaThread "NanoHttpd Main Listener" daemon [_thread_in_native, id=72963, stack(0x0000000146a01000,0x0000000146b01000)] 0x0000000100ddf000 JavaThread "pool-6-thread-1" [_thread_blocked, id=70915, stack(0x0000000145b0c000,0x0000000145c0c000)] 0x0000000100e27000 JavaThread "pool-5-thread-1" [_thread_blocked, id=70403, stack(0x0000000145a09000,0x0000000145b09000)] 0x00000001025c1800 JavaThread "pool-4-thread-1" [_thread_blocked, id=69891, stack(0x0000000145906000,0x0000000145a06000)] 0x000000010268f000 JavaThread "pool-3-thread-1" [_thread_blocked, id=69379, stack(0x000000013aeb7000,0x000000013afb7000)] 0x000000010155e800 JavaThread "pool-2-thread-1" [_thread_blocked, id=68867, stack(0x000000013ab70000,0x000000013ac70000)] 0x0000000101561000 JavaThread "pool-1-thread-1" [_thread_blocked, id=68355, stack(0x000000013a6d6000,0x000000013a7d6000)] 0x0000000102c67000 JavaThread "AWT-EventQueue-0" [_thread_in_Java, id=63235, stack(0x0000000135e82000,0x0000000135f82000)] 0x00000001010e1800 JavaThread "TimerQueue" daemon [_thread_blocked, id=62723, stack(0x0000000135aed000,0x0000000135bed000)] 0x000000010256d000 JavaThread "Java2D Disposer" daemon [_thread_blocked, id=60443, stack(0x0000000134901000,0x0000000134a01000)] =>0x0000000102c18800 JavaThread "Java2D Queue Flusher" daemon [_thread_in_native, id=59399, stack(0x0000000132ef0000,0x0000000132ff0000)] 0x000000010247b800 JavaThread "SCR Component Actor" daemon [_thread_blocked, id=57863, stack(0x0000000132d8a000,0x0000000132e8a000)] 0x0000000102493800 JavaThread "Thread-6" daemon [_thread_in_native, id=57623, stack(0x0000000132a87000,0x0000000132b87000)] 0x00000001009fa000 JavaThread "Thread-5" daemon [_thread_blocked, id=56371, stack(0x0000000132916000,0x0000000132a16000)] 0x00000001021f6800 JavaThread "Timer-0" daemon [_thread_blocked, id=56599, stack(0x0000000132813000,0x0000000132913000)] 0x0000000102ae1000 JavaThread "FelixStartLevel" daemon [_thread_blocked, id=55111, stack(0x0000000131fd3000,0x00000001320d3000)] 0x0000000102173800 JavaThread "FelixDispatchQueue" [_thread_blocked, id=54855, stack(0x0000000131d5b000,0x0000000131e5b000)] 0x00000001011f5000 JavaThread "AWT-Shutdown" [_thread_blocked, id=55815, stack(0x0000000131a58000,0x0000000131b58000)] 0x000000010108d800 JavaThread "AppKit Thread" daemon [_thread_in_native, id=4879, stack(0x00007fff5f400000,0x00007fff5fc00000)] 0x000000010205d800 JavaThread "Service Thread" daemon [_thread_blocked, id=21763, stack(0x000000012b74a000,0x000000012b84a000)] 0x0000000102811800 JavaThread "C1 CompilerThread3" daemon [_thread_blocked, id=21251, stack(0x000000012b647000,0x000000012b747000)] 0x0000000102809800 JavaThread "C2 CompilerThread2" daemon [_thread_blocked, id=20739, stack(0x000000012b544000,0x000000012b644000)] 0x000000010080d800 JavaThread "C2 CompilerThread1" daemon [_thread_blocked, id=20227, stack(0x000000012b441000,0x000000012b541000)] 0x000000010200f800 JavaThread "C2 CompilerThread0" daemon [_thread_blocked, id=19715, stack(0x000000012b33e000,0x000000012b43e000)] 0x0000000102003000 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=18959, stack(0x000000012b23b000,0x000000012b33b000)] 0x0000000102008000 JavaThread "Finalizer" daemon [_thread_blocked, id=18179, stack(0x000000012b0f7000,0x000000012b1f7000)] 0x0000000102001000 JavaThread "Reference Handler" daemon [_thread_blocked, id=17667, stack(0x000000012aff4000,0x000000012b0f4000)] Other Threads: 0x0000000101064000 VMThread [stack: 0x000000012aef1000,0x000000012aff1000] [id=17155] 0x000000010200b000 WatcherThread [stack: 0x000000012b84d000,0x000000012b94d000] [id=22275] VM state:not at safepoint (normal execution) VM Mutex/Monitor currently owned by a thread: None Heap: PSYoungGen total 1089536K, used 181969K [0x0000000715580000, 0x0000000765a00000, 0x00000007c0000000) eden space 879616K, 3% used [0x0000000715580000,0x0000000717526940,0x000000074b080000) from space 209920K, 71% used [0x0000000758500000,0x000000076170db78,0x0000000765200000) to space 217600K, 0% used [0x000000074b080000,0x000000074b080000,0x0000000758500000) ParOldGen total 1131008K, used 447063K [0x00000005c0000000, 0x0000000605080000, 0x0000000715580000) object space 1131008K, 39% used [0x00000005c0000000,0x00000005db495ed0,0x0000000605080000) Metaspace used 51433K, capacity 54462K, committed 54784K, reserved 1095680K class space used 6863K, capacity 7585K, committed 7680K, reserved 1048576K Card table byte_map: [0x0000000115559000,0x000000011655a000] byte_map_base: 0x0000000112759000 Marking Bits: (ParMarkBitMap*) 0x0000000105a17390 Begin Bits: [0x000000011781d000, 0x000000011f81d000) End Bits: [0x000000011f81d000, 0x000000012781d000) Polling page: 0x00000001000fa000 CodeCache: size=245760Kb used=40829Kb max_used=41226Kb free=204930Kb bounds [0x0000000106199000, 0x0000000108a39000, 0x0000000115199000] total_blobs=11801 nmethods=11057 adapters=651 compilation: enabled Compilation events (10 events): Event: 18711.177 Thread 0x0000000102811800 14779 3 com.affymetrix.igb.thresholding.GraphScoreThreshSetter::setGraphs (520 bytes) Event: 18711.182 Thread 0x0000000102811800 nmethod 14779 0x0000000107f568d0 code [0x0000000107f57620, 0x0000000107f62928] Event: 18711.183 Thread 0x0000000102811800 14780 3 com.affymetrix.igb.thresholding.GraphScoreThreshSetter::turnOffListening (113 bytes) Event: 18711.184 Thread 0x0000000102811800 nmethod 14780 0x00000001079633d0 code [0x0000000107963800, 0x0000000107966d98] Event: 18720.108 Thread 0x0000000102811800 14781 3 javax.swing.plaf.basic.BasicToolTipUI::componentChanged (87 bytes) Event: 18720.110 Thread 0x0000000102811800 nmethod 14781 0x00000001086cfb90 code [0x00000001086cffc0, 0x00000001086d2558] Event: 18722.469 Thread 0x0000000102811800 14782 3 com.affymetrix.genometryImpl.symmetry.impl.LeafSingletonSymmetry::getSpan (12 bytes) Event: 18722.469 Thread 0x0000000102811800 nmethod 14782 0x00000001077d3050 code [0x00000001077d31c0, 0x00000001077d33f0] Event: 18722.484 Thread 0x000000010080d800 14783 ! 4 sun.lwawt.LWKeyboardFocusManagerPeer::getCurrentFocusedWindow (16 bytes) Event: 18722.485 Thread 0x000000010080d800 nmethod 14783 0x00000001086cf7d0 code [0x00000001086cf920, 0x00000001086cfb18] GC Heap History (10 events): Event: 15566.127 GC heap before {Heap before GC invocations=43 (full 2): PSYoungGen total 1065472K, used 1051515K [0x0000000715580000, 0x0000000761800000, 0x00000007c0000000) eden space 955904K, 100% used [0x0000000715580000,0x000000074fb00000,0x000000074fb00000) from space 109568K, 87% used [0x000000075ad00000,0x0000000760a5ec00,0x0000000761800000) to space 145920K, 0% used [0x000000074fb00000,0x000000074fb00000,0x0000000758980000) ParOldGen total 432640K, used 301523K [0x00000005c0000000, 0x00000005da680000, 0x0000000715580000) object space 432640K, 69% used [0x00000005c0000000,0x00000005d2674d60,0x00000005da680000) Metaspace used 51280K, capacity 54222K, committed 54528K, reserved 1095680K class space used 6863K, capacity 7589K, committed 7680K, reserved 1048576K Event: 15566.143 GC heap after Heap after GC invocations=43 (full 2): PSYoungGen total 983552K, used 60458K [0x0000000715580000, 0x000000075f380000, 0x00000007c0000000) eden space 922624K, 0% used [0x0000000715580000,0x0000000715580000,0x000000074da80000) from space 60928K, 99% used [0x000000074fb00000,0x000000075360a9d0,0x0000000753680000) to space 143872K, 0% used [0x0000000756700000,0x0000000756700000,0x000000075f380000) ParOldGen total 432640K, used 301523K [0x00000005c0000000, 0x00000005da680000, 0x0000000715580000) object space 432640K, 69% used [0x00000005c0000000,0x00000005d2674d60,0x00000005da680000) Metaspace used 51280K, capacity 54222K, committed 54528K, reserved 1095680K class space used 6863K, capacity 7589K, committed 7680K, reserved 1048576K } Event: 15747.765 GC heap before {Heap before GC invocations=44 (full 2): PSYoungGen total 983552K, used 983082K [0x0000000715580000, 0x000000075f380000, 0x00000007c0000000) eden space 922624K, 100% used [0x0000000715580000,0x000000074da80000,0x000000074da80000) from space 60928K, 99% used [0x000000074fb00000,0x000000075360a9d0,0x0000000753680000) to space 143872K, 0% used [0x0000000756700000,0x0000000756700000,0x000000075f380000) ParOldGen total 432640K, used 301523K [0x00000005c0000000, 0x00000005da680000, 0x0000000715580000) object space 432640K, 69% used [0x00000005c0000000,0x00000005d2674d60,0x00000005da680000) Metaspace used 51304K, capacity 54350K, committed 54528K, reserved 1095680K class space used 6863K, capacity 7589K, committed 7680K, reserved 1048576K Event: 15747.874 GC heap after Heap after GC invocations=44 (full 2): PSYoungGen total 995840K, used 143863K [0x0000000715580000, 0x0000000765e80000, 0x00000007c0000000) eden space 851968K, 0% used [0x0000000715580000,0x0000000715580000,0x0000000749580000) from space 143872K, 99% used [0x0000000756700000,0x000000075f37dfb8,0x000000075f380000) to space 214528K, 0% used [0x0000000749580000,0x0000000749580000,0x0000000756700000) ParOldGen total 447488K, used 447148K [0x00000005c0000000, 0x00000005db500000, 0x0000000715580000) object space 447488K, 99% used [0x00000005c0000000,0x00000005db4ab0a0,0x00000005db500000) Metaspace used 51304K, capacity 54350K, committed 54528K, reserved 1095680K class space used 6863K, capacity 7589K, committed 7680K, reserved 1048576K } Event: 15747.874 GC heap before {Heap before GC invocations=45 (full 3): PSYoungGen total 995840K, used 143863K [0x0000000715580000, 0x0000000765e80000, 0x00000007c0000000) eden space 851968K, 0% used [0x0000000715580000,0x0000000715580000,0x0000000749580000) from space 143872K, 99% used [0x0000000756700000,0x000000075f37dfb8,0x000000075f380000) to space 214528K, 0% used [0x0000000749580000,0x0000000749580000,0x0000000756700000) ParOldGen total 447488K, used 447148K [0x00000005c0000000, 0x00000005db500000, 0x0000000715580000) object space 447488K, 99% used [0x00000005c0000000,0x00000005db4ab0a0,0x00000005db500000) Metaspace used 51304K, capacity 54350K, committed 54528K, reserved 1095680K class space used 6863K, capacity 7589K, committed 7680K, reserved 1048576K Event: 15748.643 GC heap after Heap after GC invocations=45 (full 3): PSYoungGen total 995840K, used 29647K [0x0000000715580000, 0x0000000765e80000, 0x00000007c0000000) eden space 851968K, 0% used [0x0000000715580000,0x0000000715580000,0x0000000749580000) from space 143872K, 20% used [0x0000000756700000,0x00000007583f3ea8,0x000000075f380000) to space 214528K, 0% used [0x0000000749580000,0x0000000749580000,0x0000000756700000) ParOldGen total 1131008K, used 447047K [0x00000005c0000000, 0x0000000605080000, 0x0000000715580000) object space 1131008K, 39% used [0x00000005c0000000,0x00000005db491ed0,0x0000000605080000) Metaspace used 51286K, capacity 54320K, committed 54528K, reserved 1095680K class space used 6861K, capacity 7584K, committed 7680K, reserved 1048576K } Event: 16008.726 GC heap before {Heap before GC invocations=46 (full 3): PSYoungGen total 995840K, used 881615K [0x0000000715580000, 0x0000000765e80000, 0x00000007c0000000) eden space 851968K, 100% used [0x0000000715580000,0x0000000749580000,0x0000000749580000) from space 143872K, 20% used [0x0000000756700000,0x00000007583f3ea8,0x000000075f380000) to space 214528K, 0% used [0x0000000749580000,0x0000000749580000,0x0000000756700000) ParOldGen total 1131008K, used 447047K [0x00000005c0000000, 0x0000000605080000, 0x0000000715580000) object space 1131008K, 39% used [0x00000005c0000000,0x00000005db491ed0,0x0000000605080000) Metaspace used 51293K, capacity 54320K, committed 54528K, reserved 1095680K class space used 6861K, capacity 7584K, committed 7680K, reserved 1048576K Event: 16008.765 GC heap after Heap after GC invocations=46 (full 3): PSYoungGen total 1066496K, used 63933K [0x0000000715580000, 0x0000000765200000, 0x00000007c0000000) eden space 851968K, 0% used [0x0000000715580000,0x0000000715580000,0x0000000749580000) from space 214528K, 29% used [0x0000000749580000,0x000000074d3ef440,0x0000000756700000) to space 209920K, 0% used [0x0000000758500000,0x0000000758500000,0x0000000765200000) ParOldGen total 1131008K, used 447055K [0x00000005c0000000, 0x0000000605080000, 0x0000000715580000) object space 1131008K, 39% used [0x00000005c0000000,0x00000005db493ed0,0x0000000605080000) Metaspace used 51293K, capacity 54320K, committed 54528K, reserved 1095680K class space used 6861K, capacity 7584K, committed 7680K, reserved 1048576K } Event: 18722.491 GC heap before {Heap before GC invocations=47 (full 3): PSYoungGen total 1066496K, used 915901K [0x0000000715580000, 0x0000000765200000, 0x00000007c0000000) eden space 851968K, 100% used [0x0000000715580000,0x0000000749580000,0x0000000749580000) from space 214528K, 29% used [0x0000000749580000,0x000000074d3ef440,0x0000000756700000) to space 209920K, 0% used [0x0000000758500000,0x0000000758500000,0x0000000765200000) ParOldGen total 1131008K, used 447055K [0x00000005c0000000, 0x0000000605080000, 0x0000000715580000) object space 1131008K, 39% used [0x00000005c0000000,0x00000005db493ed0,0x0000000605080000) Metaspace used 51433K, capacity 54462K, committed 54784K, reserved 1095680K class space used 6863K, capacity 7585K, committed 7680K, reserved 1048576K Event: 18722.535 GC heap after Heap after GC invocations=47 (full 3): PSYoungGen total 1089536K, used 149558K [0x0000000715580000, 0x0000000765a00000, 0x00000007c0000000) eden space 879616K, 0% used [0x0000000715580000,0x0000000715580000,0x000000074b080000) from space 209920K, 71% used [0x0000000758500000,0x000000076170db78,0x0000000765200000) to space 217600K, 0% used [0x000000074b080000,0x000000074b080000,0x0000000758500000) ParOldGen total 1131008K, used 447063K [0x00000005c0000000, 0x0000000605080000, 0x0000000715580000) object space 1131008K, 39% used [0x00000005c0000000,0x00000005db495ed0,0x0000000605080000) Metaspace used 51433K, capacity 54462K, committed 54784K, reserved 1095680K class space used 6863K, capacity 7585K, committed 7680K, reserved 1048576K } Deoptimization events (10 events): Event: 17798.820 Thread 0x0000000102c67000 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000106e70238 method=sun.java2d.opengl.OGLBlitLoops.Blit(Lsun/java2d/SurfaceData;Lsun/java2d/SurfaceData;Ljava/awt/Composite;Lsun/java2d/pipe/Region;Ljava/awt/geom/AffineTransform;IIIIIDDDDI Event: 17798.843 Thread 0x0000000102c67000 Uncommon trap: reason=unloaded action=reinterpret pc=0x0000000107b6cdec method=sun.java2d.pipe.BufferedContext.validate(Lsun/java2d/pipe/hw/AccelSurface;Lsun/java2d/pipe/hw/AccelSurface;Lsun/java2d/pipe/Region;Ljava/awt/Composite;Ljava/awt/geom/AffineTran Event: 17798.849 Thread 0x0000000102c67000 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000107fee1c0 method=sun.java2d.SurfaceData.validatePipe(Lsun/java2d/SunGraphics2D;)V @ 321 Event: 17799.046 Thread 0x0000000102c67000 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000107be7964 method=sun.awt.image.SurfaceManager.getImageScale(Ljava/awt/Image;)I @ 18 Event: 17799.046 Thread 0x0000000102c67000 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000106e69f38 method=sun.java2d.opengl.OGLBlitLoops.Blit(Lsun/java2d/SurfaceData;Lsun/java2d/SurfaceData;Ljava/awt/Composite;Lsun/java2d/pipe/Region;Ljava/awt/geom/AffineTransform;IIIIIDDDDI Event: 17799.071 Thread 0x0000000102c67000 Uncommon trap: reason=class_check action=maybe_recompile pc=0x0000000107fee1c0 method=sun.java2d.SurfaceData.validatePipe(Lsun/java2d/SunGraphics2D;)V @ 321 Event: 17799.190 Thread 0x0000000102c67000 Uncommon trap: reason=bimorphic action=maybe_recompile pc=0x0000000107521af8 method=sun.java2d.pipe.DrawImage.copyImage(Lsun/java2d/SunGraphics2D;Ljava/awt/Image;IILjava/awt/Color;)Z @ 2 Event: 18656.857 Thread 0x0000000102c67000 Uncommon trap: reason=unreached action=reinterpret pc=0x00000001073623a8 method=java.security.AccessControlContext.optimize()Ljava/security/AccessControlContext; @ 279 Event: 18656.857 Thread 0x0000000102c67000 Uncommon trap: reason=unreached action=reinterpret pc=0x0000000107cfaa3c method=javax.swing.text.PlainView.updateDamage(Ljavax/swing/event/DocumentEvent;Ljava/awt/Shape;Ljavax/swing/text/ViewFactory;)V @ 274 Event: 18669.006 Thread 0x0000000102c67000 Uncommon trap: reason=unreached action=reinterpret pc=0x000000010665f3c4 method=com.affymetrix.genometryImpl.symmetry.impl.LeafSingletonSymmetry.getSpan(Lcom/affymetrix/genometryImpl/BioSeq;)Lcom/affymetrix/genometryImpl/SeqSpan; @ 5 Internal exceptions (10 events): Event: 18687.807 Thread 0x0000000102c67000 Exception (0x0000000738d515a8) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/runtime/sharedRuntime.cpp, line 604] Event: 18687.811 Thread 0x0000000102c67000 Exception (0x0000000738d59a80) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/runtime/sharedRuntime.cpp, line 604] Event: 18705.825 Thread 0x0000000102c67000 Exception (0x00000007392dd210) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/interpreter/linkResolver.cpp, line 1178] Event: 18705.825 Thread 0x0000000102c67000 Exception (0x00000007392dd210) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/prims/jvm.cpp, line 1316] Event: 18705.825 Thread 0x0000000102c67000 Exception (0x00000007392dd210) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/prims/jvm.cpp, line 1316] Event: 18705.831 Thread 0x0000000102c67000 Exception (0x0000000739339b28) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/runtime/sharedRuntime.cpp, line 604] Event: 18705.833 Thread 0x0000000102c67000 Exception (0x00000007393413a8) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/runtime/sharedRuntime.cpp, line 604] Event: 18705.995 Thread 0x0000000102c67000 Exception (0x0000000745024480) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/prims/jvm.cpp, line 1316] Event: 18722.539 Thread 0x0000000102c18800 Exception (0x0000000716b8a650) thrown at [/HUDSON3/workspace/8-2-build-macosx-x Event: 18722.539 Thread 0x0000000102c18800 Exception (0x0000000716b8a650) thrown at [/HUDSON3/workspace/8-2-build-macosx-x86_64/jdk8u25/1514/hotspot/src/share/vm/prims/jni.cpp, line 716] Events (10 events): Event: 18722.535 Executing VM operation: RevokeBias Event: 18722.536 Executing VM operation: RevokeBias done Event: 18722.536 Executing VM operation: RevokeBias Event: 18722.537 Executing VM operation: RevokeBias done Event: 18722.537 Executing VM operation: RevokeBias Event: 18722.537 Executing VM operation: RevokeBias done Event: 18722.537 Executing VM operation: RevokeBias Event: 18722.537 Executing VM operation: RevokeBias done Event: 18722.537 Executing VM operation: RevokeBias Event: 18722.537 Executing VM operation: RevokeBias done Dynamic libraries: 0x0000000007d8c000 /System/Library/Frameworks/Cocoa.framework/Versions/A/Cocoa 0x0000000007d8c000 /usr/lib/libz.1.dylib 0x0000000007d8c000 /usr/lib/libSystem.B.dylib 0x0000000007d8c000 /System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation 0x0000000007d8c000 /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation 0x0000000007d8c000 /usr/lib/libobjc.A.dylib 0x0000000007d8c000 /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit 0x0000000007d8c000 /System/Library/Frameworks/CoreData.framework/Versions/A/CoreData 0x0000000007d8c000 /System/Library/PrivateFrameworks/RemoteViewServices.framework/Versions/A/RemoteViewServices 0x0000000007d8c000 /System/Library/PrivateFrameworks/UIFoundation.framework/Versions/A/UIFoundation 0x0000000007d8c000 /System/Library/Frameworks/IOSurface.framework/Versions/A/IOSurface 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/ApplicationServices 0x0000000007d8c000 /System/Library/Frameworks/AudioToolbox.framework/Versions/A/AudioToolbox 0x0000000007d8c000 /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit 0x0000000007d8c000 /System/Library/PrivateFrameworks/DataDetectorsCore.framework/Versions/A/DataDetectorsCore 0x0000000007d8c000 /System/Library/PrivateFrameworks/DesktopServicesPriv.framework/Versions/A/DesktopServicesPriv 0x0000000007d8c000 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox 0x0000000007d8c000 /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore 0x0000000007d8c000 /System/Library/Frameworks/Security.framework/Versions/A/Security 0x0000000007d8c000 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition 0x0000000007d8c000 /usr/lib/libauto.dylib 0x0000000007d8c000 /usr/lib/libicucore.A.dylib 0x0000000007d8c000 /usr/lib/libxml2.2.dylib 0x0000000007d8c000 /System/Library/PrivateFrameworks/CoreUI.framework/Versions/A/CoreUI 0x0000000007d8c000 /System/Library/Frameworks/CoreAudio.framework/Versions/A/CoreAudio 0x0000000007d8c000 /System/Library/Frameworks/DiskArbitration.framework/Versions/A/DiskArbitration 0x0000000007d8c000 /usr/lib/liblangid.dylib 0x0000000007d8c000 /System/Library/PrivateFrameworks/MultitouchSupport.framework/Versions/A/MultitouchSupport 0x0000000007d8c000 /System/Library/Frameworks/IOKit.framework/Versions/A/IOKit 0x0000000007d8c000 /usr/lib/libDiagnosticMessagesClient.dylib 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices 0x0000000007d8c000 /System/Library/PrivateFrameworks/PerformanceAnalysis.framework/Versions/A/PerformanceAnalysis 0x0000000007d8c000 /System/Library/PrivateFrameworks/GenerationalStorage.framework/Versions/A/GenerationalStorage 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL 0x0000000007d8c000 /System/Library/PrivateFrameworks/Sharing.framework/Versions/A/Sharing 0x0000000007d8c000 /System/Library/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics 0x0000000007d8c000 /System/Library/Frameworks/CoreText.framework/Versions/A/CoreText 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/ImageIO 0x0000000007d8c000 /usr/lib/libextension.dylib 0x0000000007d8c000 /System/Library/PrivateFrameworks/Backup.framework/Versions/A/Backup 0x0000000007d8c000 /usr/lib/libarchive.2.dylib 0x0000000007d8c000 /System/Library/Frameworks/CFNetwork.framework/Versions/A/CFNetwork 0x0000000007d8c000 /System/Library/Frameworks/SystemConfiguration.framework/Versions/A/SystemConfiguration 0x0000000007d8c000 /usr/lib/libCRFSuite.dylib 0x0000000007d8c000 /usr/lib/libc++.1.dylib 0x0000000007d8c000 /usr/lib/libc++abi.dylib 0x0000000007d8c000 /usr/lib/system/libcache.dylib 0x0000000007d8c000 /usr/lib/system/libcommonCrypto.dylib 0x0000000007d8c000 /usr/lib/system/libcompiler_rt.dylib 0x0000000007d8c000 /usr/lib/system/libcopyfile.dylib 0x0000000007d8c000 /usr/lib/system/libcorecrypto.dylib 0x0000000007d8c000 /usr/lib/system/libdispatch.dylib 0x0000000007d8c000 /usr/lib/system/libdyld.dylib 0x0000000007d8c000 /usr/lib/system/libkeymgr.dylib 0x0000000007d8c000 /usr/lib/system/liblaunch.dylib 0x0000000007d8c000 /usr/lib/system/libmacho.dylib 0x0000000007d8c000 /usr/lib/system/libquarantine.dylib 0x0000000007d8c000 /usr/lib/system/libremovefile.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_asl.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_blocks.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_c.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_configuration.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_coreservices.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_coretls.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_dnssd.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_info.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_kernel.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_m.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_malloc.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_network.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_networkextension.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_notify.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_platform.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_pthread.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_sandbox.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_secinit.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_stats.dylib 0x0000000007d8c000 /usr/lib/system/libsystem_trace.dylib 0x0000000007d8c000 /usr/lib/system/libunc.dylib 0x0000000007d8c000 /usr/lib/system/libunwind.dylib 0x0000000007d8c000 /usr/lib/system/libxpc.dylib 0x0000000007d8c000 /usr/lib/libbz2.1.0.dylib 0x0000000007d8c000 /usr/lib/liblzma.5.dylib 0x0000000007d8c000 /usr/lib/libbsm.0.dylib 0x0000000007d8c000 /usr/lib/libsqlite3.dylib 0x0000000007d8c000 /usr/lib/system/libkxld.dylib 0x0000000007d8c000 /usr/lib/libxar.1.dylib 0x0000000007d8c000 /usr/lib/libpam.2.dylib 0x0000000007d8c000 /usr/lib/libOpenScriptingUtil.dylib 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/FSEvents.framework/Versions/A/FSEvents 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/CarbonCore.framework/Versions/A/CarbonCore 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/Metadata.framework/Versions/A/Metadata 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/OSServices.framework/Versions/A/OSServices 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/SearchKit.framework/Versions/A/SearchKit 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/AE.framework/Versions/A/AE 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/LaunchServices.framework/Versions/A/LaunchServices 0x0000000007d8c000 /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/DictionaryServices.framework/Versions/A/DictionaryServices 0x0000000007d8c000 /System/Library/Frameworks/NetFS.framework/Versions/A/NetFS 0x0000000007d8c000 /System/Library/PrivateFrameworks/NetAuth.framework/Versions/A/NetAuth 0x0000000007d8c000 /System/Library/PrivateFrameworks/login.framework/Versions/A/Frameworks/loginsupport.framework/Versions/A/loginsupport 0x0000000007d8c000 /System/Library/PrivateFrameworks/TCC.framework/Versions/A/TCC 0x0000000007d8c000 /usr/lib/libmecabra.dylib 0x0000000007d8c000 /System/Library/PrivateFrameworks/LanguageModeling.framework/Versions/A/LanguageModeling 0x0000000007d8c000 /usr/lib/libcmph.dylib 0x0000000007d8c000 /usr/lib/libiconv.2.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenDirectory.framework/Versions/A/Frameworks/CFOpenDirectory.framework/Versions/A/CFOpenDirectory 0x0000000007d8c000 /System/Library/Frameworks/ServiceManagement.framework/Versions/A/ServiceManagement 0x0000000007d8c000 /usr/lib/libxslt.1.dylib 0x0000000007d8c000 /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/PrintCore.framework/Versions/A/PrintCore 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/SpeechSynthesis.framework/Versions/A/SpeechSynthesis 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib 0x0000000007d8c000 /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLinearAlgebra.dylib 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libFontParser.dylib 0x0000000007d8c000 /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/Resources/libFontRegistry.dylib 0x0000000007d8c000 /System/Library/PrivateFrameworks/AppleVPA.framework/Versions/A/AppleVPA 0x0000000007d8c000 /System/Library/PrivateFrameworks/AppleJPEG.framework/Versions/A/AppleJPEG 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libJPEG.dylib 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libJP2.dylib 0x0000000007d8c000 /System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libRadiance.dylib 0x0000000007d8c000 /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib 0x0000000007d8c000 /usr/lib/libcups.2.dylib 0x0000000007d8c000 /System/Library/Frameworks/Kerberos.framework/Versions/A/Kerberos 0x0000000007d8c000 /System/Library/Frameworks/GSS.framework/Versions/A/GSS 0x0000000007d8c000 /usr/lib/libresolv.9.dylib 0x0000000007d8c000 /System/Library/PrivateFrameworks/Heimdal.framework/Versions/A/Heimdal 0x0000000007d8c000 /usr/lib/libheimdal-asn1.dylib 0x0000000007d8c000 /System/Library/Frameworks/OpenDirectory.framework/Versions/A/OpenDirectory 0x0000000007d8c000 /System/Library/PrivateFrameworks/CommonAuth.framework/Versions/A/CommonAuth 0x0000000007d8c000 /System/Library/Frameworks/SecurityFoundation.framework/Versions/A/SecurityFoundation 0x0000000007d8c000 /System/Library/Frameworks/QuartzCore.framework/Versions/A/Frameworks/CoreImage.framework/Versions/A/CoreImage 0x0000000007d8c000 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-Dexe4j.moduleName=/Applications/Integrated Genome Browser/IntegratedGenomeBrowser.app -Di4j.ownBundlePath=/Applications/Integrated Genome Browser/IntegratedGenomeBrowser.app -Di4j.jreBundle=/Applications/Integrated Genome Browser/IntegratedGenomeBrowser.app/../.install4j/jre.bundle java_command: com.install4j.runtime.launcher.MacLauncher java_class_path (initial): /Applications/Integrated Genome Browser/IntegratedGenomeBrowser.app/../.install4j/i4jruntime.jar:/Applications/Integrated Genome Browser/IntegratedGenomeBrowser.app/../igb_exe.jar Launcher Type: SUN_STANDARD Environment Variables: PATH=/usr/bin:/bin:/usr/sbin:/sbin SHELL=/bin/bash Signal Handlers: SIGSEGV: [libjvm.dylib+0x579dc7], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_ONSTACK|SA_RESTART|SA_SIGINFO SIGBUS: [libjvm.dylib+0x579dc7], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGFPE: [libjvm.dylib+0x45b030], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGPIPE: [libjvm.dylib+0x45b030], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGXFSZ: [libjvm.dylib+0x45b030], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGILL: [libjvm.dylib+0x45b030], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGUSR1: SIG_DFL, sa_mask[0]=00000000000000000000000000000000, sa_flags=none SIGUSR2: [libjvm.dylib+0x45ab4e], sa_mask[0]=00000000000000000000000000000000, sa_flags=SA_RESTART|SA_SIGINFO SIGHUP: [libjvm.dylib+0x459121], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGINT: [libjvm.dylib+0x459121], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGTERM: [libjvm.dylib+0x459121], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO SIGQUIT: [libjvm.dylib+0x459121], sa_mask[0]=11111111011111110111111111111111, sa_flags=SA_RESTART|SA_SIGINFO --------------- S Y S T E M --------------- OS:Bsduname:Darwin 14.0.0 Darwin Kernel Version 14.0.0: Fri Sep 19 00:26:44 PDT 2014; root:xnu-2782.1.97~2/RELEASE_X86_64 x86_64 rlimit: STACK 8192k, CORE 0k, NPROC 709, NOFILE 10240, AS infinity load average:1.18 1.31 1.26 CPU:total 8 (4 cores per cpu, 2 threads per core) family 6 model 60 stepping 3, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1, sse4.2, popcnt, avx, avx2, aes, clmul, erms, rtm, lzcnt, ht, tsc, tscinvbit, bmi1, bmi2 Memory: 4k page, physical 33554432k(3126748k free) /proc/meminfo: vm_info: Java HotSpot(TM) 64-Bit Server VM (25.25-b02) for bsd-amd64 JRE (1.8.0_25-b17), built on Sep 17 2014 16:56:50 by "java_re" with gcc 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2336.11.00) time: Mon Jan 26 08:36:16 2015 elapsed time: 18722 seconds (0d 5h 12m 2s)