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  1. Bug Repository
  2. BUG-197

name and path from file

          Details

          • Type: Improvement
          • Status: Closed (View Workflow)
          • Priority: Minor
          • Resolution: Fixed
          • Labels:
            None

            Description

            Please Re-assign or not as you see fit

            From David Nix, Sourceforge
            http://sourceforge.net/tracker/?func=detail&atid=714747&aid=3463068&group_id=129420

            When loading a data track from file the name and path are being lower cased. This makes it hard to read camel cased names. Please leave as it is. I don't know when this started but it is in 6.6.3 (9418).

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                relates to

                Task - A task that needs to be done. BUG-623 File management bugs

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

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                  hiralv Hiral Vora (Inactive) added a comment -

                  Can you reproduce it?

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                  hiralv Hiral Vora (Inactive) added a comment - Can you reproduce it?
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                  alyssa Alyssa Gulledge (Inactive) added a comment -

                  I am not even sure what the problem is! Where is he seeing the name and path? I mean, I would not be opposed to seeing the path for locally loaded files in the info tab, but I don't know what he is talking about.

                  Show
                  alyssa Alyssa Gulledge (Inactive) added a comment - I am not even sure what the problem is! Where is he seeing the name and path? I mean, I would not be opposed to seeing the path for locally loaded files in the info tab, but I don't know what he is talking about.
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                  ann.loraine Ann Loraine added a comment -

                  Camel case is described here:

                  http://en.wikipedia.org/wiki/CamelCase

                  See section titled "Current usage in programming."

                  He's talking about capitalization. If a graph or annotation file name contains upper case letters, he doesn't want them to be changed to lower case when displayed in IGB.

                  Feel free to email him if you have questions!

                  Show
                  ann.loraine Ann Loraine added a comment - Camel case is described here: http://en.wikipedia.org/wiki/CamelCase See section titled "Current usage in programming." He's talking about capitalization. If a graph or annotation file name contains upper case letters, he doesn't want them to be changed to lower case when displayed in IGB. Feel free to email him if you have questions!
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                  ann.loraine Ann Loraine added a comment -

                  Places where file names appear:

                  • track labels
                  • Data Management Table
                  • Data Sources and Data sets
                  Show
                  ann.loraine Ann Loraine added a comment - Places where file names appear: track labels Data Management Table Data Sources and Data sets
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Fixed in r9615.

                  Note : This only effects graphs only. i.e. gr, wig, useq etc.

                  Show
                  hiralv Hiral Vora (Inactive) added a comment - Fixed in r9615. Note : This only effects graphs only. i.e. gr, wig, useq etc.
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                  hiralv Hiral Vora (Inactive) added a comment -

                  One useq is available here http://bioserver.hci.utah.edu/TempFiles/TestOfCaseForCe6_C_elegans_May_2008.useq

                  Show
                  hiralv Hiral Vora (Inactive) added a comment - One useq is available here http://bioserver.hci.utah.edu/TempFiles/TestOfCaseForCe6_C_elegans_May_2008.useq
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                  smylapur Vineeth Mylapur (Inactive) added a comment -

                  Passed 7.0 (11934) on windows.

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                  smylapur Vineeth Mylapur (Inactive) added a comment - Passed 7.0 (11934) on windows.
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                  richard Richard Linchangco (Inactive) added a comment -

                  Passed V.13624, Mac, Java 1.06.0_37

                  File names and locations are left unchanged when displayed in IGB.
                  Tested with .gr .wig and .useq files:

                  http://bioviz.org/filerepo/gr/test1.gr (downloaded and modified name to tEsT1.gr then loaded locally)
                  http://bioviz.org/filerepo/testFile.wig
                  http://bioviz.org/filerepo/useq/chr17_H_sapiens_Mar_2006_StrandedReadCoverage_Graph.useq

                  Track Name locations checked for synchronization:

                  • Track label-PASSED
                  • 'Data Management Table' under 'Data Access' Tab-PASSED
                  • 'Available Data' data tree under 'Data Access' Tab-PASSED
                  • 'Tracks' Tab under 'Preferences'-PASSED
                  Show
                  richard Richard Linchangco (Inactive) added a comment - Passed V.13624, Mac, Java 1.06.0_37 File names and locations are left unchanged when displayed in IGB. Tested with .gr .wig and .useq files: http://bioviz.org/filerepo/gr/test1.gr (downloaded and modified name to tEsT1.gr then loaded locally) http://bioviz.org/filerepo/testFile.wig http://bioviz.org/filerepo/useq/chr17_H_sapiens_Mar_2006_StrandedReadCoverage_Graph.useq Track Name locations checked for synchronization : Track label- PASSED 'Data Management Table' under 'Data Access' Tab- PASSED 'Available Data' data tree under 'Data Access' Tab- PASSED 'Tracks' Tab under 'Preferences'- PASSED

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                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
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                      • Created:
                        Updated:
                        Resolved: