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  1. Bug Repository
  2. BUG-199

gene models should be shown with strand set to "arrow"

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None
    • Environment:

      r9642

      Description

      When gene models auto-load (from "bed" files) they should be configured with Show Strand set to "Arrow"

      This works in IGB 6.6.3 but not IGB 6.7.

      To test, open genome A_thaliana_Jun_2009. Observe that the gene models load. Zoom in on one and stretch vertically so that you can see the arrows not show up. Also, right-click the gene models' track label and select Configure. Observe that the "Arrow" box is not checked.

      Also, Dec 27 I noticed that even after I chose "arrow" option, the arrows kept getting re-drawn pointing in the wrong direction. This happened a lot when I was working with a large joined graph. Joining and unjoining seemed to switch the arrow directions back and forth. I will try to reproduce this bug and create a new issue for it; I'm mentioning it here just to let you know that there seems to be something wonky about arrows and feature strandedness.

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              • Assignee:
                Unassigned
                Reporter:
                ann.loraine Ann Loraine
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                • Created:
                  Updated:
                  Resolved: