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  1. Bug Repository
  2. BUG-208

Reads don't repack after turning labels on and then off

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None
          • Environment:

            IGB 6.7

            Description

            I noticed this while making a figure for publication.

            I loaded 16 tracks with short reads data into IGB and configured each one with customized colors.

            By mistake, I accidentally configured one read track (Wet D, see attached file) to use the "id" as the Label Field.

            When I realized my mistake, I changed it back to "None," but the reads did not repack - instead there was a bit of vertical space between each read where the label previously was shown.

            To save my place, I made a data and position bookmark.

            The white space persisted even after I re-started IGB and reloaded the data by going back to the bookmark.

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                relates to

                Task - A task that needs to be done. BUG-681 Main Window functions

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  ann.loraine Ann Loraine added a comment -

                  As always, re-assign or not as you see fit.

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                  ann.loraine Ann Loraine added a comment - As always, re-assign or not as you see fit.
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Fixed in r9641.

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                  hiralv Hiral Vora (Inactive) added a comment - Fixed in r9641.
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                  fwang4 Fuquan Wang (Inactive) added a comment - - edited

                  Passed on 7.0.0 (11997) Mac

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                  fwang4 Fuquan Wang (Inactive) added a comment - - edited Passed on 7.0.0 (11997) Mac
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                  richard Richard Linchangco (Inactive) added a comment -

                  Passed V.13814, Mac, Java 1.7.0_10

                  Changing the 'Annotation Label Field' to 'id' for one of the many track loaded into the viewer did create a small amount of vertical background space in between the reads of that track.

                  Changing the 'Annotation Label Field' to 'none' did remove this vertical space and repack the reads in that track.

                  Show
                  richard Richard Linchangco (Inactive) added a comment - Passed V.13814, Mac, Java 1.7.0_10 Changing the 'Annotation Label Field' to 'id' for one of the many track loaded into the viewer did create a small amount of vertical background space in between the reads of that track. Changing the 'Annotation Label Field' to 'none' did remove this vertical space and repack the reads in that track.

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
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                      Dates

                      • Created:
                        Updated:
                        Resolved: