Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Fixed
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Labels:None
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Environment:
IGB 6.7
Description
I noticed this while making a figure for publication.
I loaded 16 tracks with short reads data into IGB and configured each one with customized colors.
By mistake, I accidentally configured one read track (Wet D, see attached file) to use the "id" as the Label Field.
When I realized my mistake, I changed it back to "None," but the reads did not repack - instead there was a bit of vertical space between each read where the label previously was shown.
To save my place, I made a data and position bookmark.
The white space persisted even after I re-started IGB and reloaded the data by going back to the bookmark.
Attachments
Issue Links
- relates to
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BUG-681 Main Window functions
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Assignee | Ann Loraine [ aloraine ] | Hiral Vora [ hiralv ] |
| Attachment | readsdontrepack.png [ 10556 ] | |
| Description | Make test case |
I noticed this while making a figure for publication. I loaded 16 tracks with short reads data into IGB and configured each one with customized colors. By mistake, I accidentally configured one read track (Wet D, see attached file) to use the "id" as the Label Field. When I realized my mistake, I changed it back to "None," but the reads did not repack - instead there was a bit of vertical space between each read where the label previously was shown. To save my place, I made a data and position bookmark. The white space persisted even after I re-started IGB and reloaded the data by going back to the bookmark. |
Fixed in r9641.
| Assignee | Hiral Vora [ hiralv ] | Ann Loraine [ aloraine ] |
| Assignee | Ann Loraine [ aloraine ] | Alyssa Gulledge [ alyssa ] |
| Status | Open [ 1 ] | Resolved [ 5 ] |
| Assignee | Alyssa Gulledge [ alyssa ] | |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Closed [ 6 ] | Reopened [ 4 ] |
| Assignee | Fuquan Wang [ fwang4 ] |
| Status | Reopened [ 4 ] | Resolved [ 5 ] |
| Assignee | Fuquan Wang [ fwang4 ] | |
| Resolution | Fixed [ 1 ] |
| Resolution | Fixed [ 1 ] | |
| Status | Resolved [ 5 ] | Reopened [ 4 ] |
Passed V.13814, Mac, Java 1.7.0_10
Changing the 'Annotation Label Field' to 'id' for one of the many track loaded into the viewer did create a small amount of vertical background space in between the reads of that track.
Changing the 'Annotation Label Field' to 'none' did remove this vertical space and repack the reads in that track.
| Status | Reopened [ 4 ] | Resolved [ 5 ] |
| Resolution | Fixed [ 1 ] |
| Status | Resolved [ 5 ] | Closed [ 6 ] |
As always, re-assign or not as you see fit.