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  1. Bug Repository
  2. BUG-223

search doesn't work unless you visit the chromosome first

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None
          • Environment:

            this affects IGB 6.5 and probably 6.6

            Description

            I'm trying to look up genes in the mouse genome by using the search function.

            However, the only way the search feature will work is if I first visit the chromosomes where the gene is located, even when I choose the search genome option.

            To repeat:

            (0) Reset prefs to defaults, restart IGB
            (1) Choose Mus musculus
            (2) Choose M_musculus_Jul_2007
            (3) Click search tab AND unclick "also search remotely"
            (4) Choose IDs or names, genome
            (5) enter query: Ctr9
            (4) click Search
            (5) observe no results appear
            (6) Click chr7
            (7) Observe gene models load from server
            (8) click Search
            (9) Observe IGB finds the gene
            (10) Click the row
            (11) Observe IGB moves to the location and also observe the search results disappear (this is another bug)

              Attachments

                Issue Links

                is blocked by

                Task - A task that needs to be done. BUG-648 Search bugs

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

                  Ascending order - Click to sort in descending order
                  ann.loraine Ann Loraine created issue -
                  ann.loraine Ann Loraine made changes -
                  Field Original Value New Value
                  Assignee Ann Loraine [ aloraine ] Hiral Vora [ hiralv ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Ann Loraine [ aloraine ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Comment [ It is not a bug. When any data is loaded, it's name and id is stored in a hash table. When you search something, it looks up that hash table. So data needs to loaded before searching anything. ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Ann Loraine [ aloraine ] Hiral Vora [ hiralv ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  ann.loraine Ann Loraine made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Hiral Vora [ hiralv ]
                  Description I'm trying to look up genes in the mouse genome by using the search function.

                  However, the only way the search feature will work is if I first visit the chromosomes where the gene is located, even when I choose the search genome option.

                  To repeat:

                  (1) Choose Mus musculus
                  (2) Choose M_musculus_Jul_2007
                  (3) Click search tab
                  (4) Choose IDs or names, genome
                  (5) enter query: Ctr9
                  (4) click Search
                  (5) observe no results appear
                  (6) Click chr7
                  (7) Observe gene models load from server
                  (8) click Search
                  (9) Observe IGB finds the gene
                  (10) Click the row
                  (11) Observe IGB moves to the location and also observe the search results disappear (this is another bug)
                  		 I'm trying to look up genes in the mouse genome by using the search function.

                  However, the only way the search feature will work is if I first visit the chromosomes where the gene is located, even when I choose the search genome option.

                  To repeat:

                  (0) Reset prefs to defaults, restart IGB
                  (1) Choose Mus musculus
                  (2) Choose M_musculus_Jul_2007
                  (3) Click search tab AND unclick "also search remotely"
                  (4) Choose IDs or names, genome
                  (5) enter query: Ctr9
                  (4) click Search
                  (5) observe no results appear
                  (6) Click chr7
                  (7) Observe gene models load from server
                  (8) click Search
                  (9) Observe IGB finds the gene
                  (10) Click the row
                  (11) Observe IGB moves to the location and also observe the search results disappear (this is another bug)
                  ann.loraine Ann Loraine made changes -
                  Project IGB6.6 [ 10021 ] IGB 6.5.1 [ 10032 ]
                  Key IGBA-66 SIXFIVEONE-9
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  Assignee Alyssa Gulledge [ alyssa ] Katharine Kubiak [ kkubiak ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB 6.5.1 [ 10032 ] Bug Repository [ 10030 ]
                  Key SIXFIVEONE-9 BUG-223
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Assignee Katharine Kubiak [ kkubiak ] Anuj Puram [ anuj ]
                  anuj Anuj Puram (Inactive) made changes -
                  Assignee Anuj Puram [ anuj ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Fuquan Wang [ fwang4 ]
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Assignee Fuquan Wang [ fwang4 ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Katharine Kubiak [ kkubiak ]
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Assignee Katharine Kubiak [ kkubiak ] Hiral Vora [ hiralv ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Katharine Kubiak [ kkubiak ]
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  Assignee Katharine Kubiak [ kkubiak ]
                  darius darius made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Darius Bost [ darius ]
                  darius darius made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Darius Bost [ darius ]
                  Resolution Fixed [ 1 ]
                  darius darius made changes -
                  Comment [ Passed 7.0 (11982) ]
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue is blocked by BUG-648 [ BUG-648 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]
                  tkanapar Tarun Santosh (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Tarun Santosh [ tkanapar ]
                  tkanapar Tarun Santosh (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Tarun Santosh [ tkanapar ]
                  hiralv Hiral Vora (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      ann.loraine Ann Loraine
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                      Dates

                      • Created:
                        Updated:
                        Resolved: