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  1. Bug Repository
  2. BUG-289

NPE after Disabling ENSEMBL *IF* data is loaded from protected URL

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Labels:
      None

      Description

      Load A thal. Load a file from our password protected data. Enable, then disable ENSEMBL and get this error:

      Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
      at com.affymetrix.genometryImpl.GenometryModel.setSelectedSymmetries(GenometryModel.java:286)
      at com.affymetrix.genometryImpl.GenometryModel.setSelectedSymmetries(GenometryModel.java:234)
      at com.affymetrix.igb.view.SeqMapView.postSelections(SeqMapView.java:1171)
      at com.affymetrix.igb.view.SeqMapView.setAnnotatedSeq(SeqMapView.java:794)
      at com.affymetrix.igb.view.SeqMapView.setAnnotatedSeq(SeqMapView.java:652)
      at com.affymetrix.igb.view.load.GeneralLoadUtils$1.process(GeneralLoadUtils.java:783)
      at javax.swing.SwingWorker$3.run(SwingWorker.java:394)
      at sun.swing.AccumulativeRunnable.run(AccumulativeRunnable.java:95)
      at javax.swing.SwingWorker$DoSubmitAccumulativeRunnable.run(SwingWorker.java:814)
      at sun.swing.AccumulativeRunnable.run(AccumulativeRunnable.java:95)
      at javax.swing.SwingWorker$DoSubmitAccumulativeRunnable.actionPerformed(SwingWorker.java:824)
      at javax.swing.Timer.fireActionPerformed(Timer.java:291)
      at javax.swing.Timer$DoPostEvent.run(Timer.java:221)
      at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209)
      at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:677)
      at java.awt.EventQueue.access$000(EventQueue.java:85)
      at java.awt.EventQueue$1.run(EventQueue.java:638)
      at java.awt.EventQueue$1.run(EventQueue.java:636)
      at java.security.AccessController.doPrivileged(Native Method)
      at java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
      at java.awt.EventQueue.dispatchEvent(EventQueue.java:647)
      at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:296)
      at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:211)
      at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:201)
      at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:196)
      at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:188)
      at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)

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            Hide
            david David Norris (Inactive) added a comment -

            fixed in r10113

            Show
            david David Norris (Inactive) added a comment - fixed in r10113
            Hide
            fwang4 Fuquan Wang (Inactive) added a comment - - edited

            Passed on 7.0.0 (11920) Mac.

            Show
            fwang4 Fuquan Wang (Inactive) added a comment - - edited Passed on 7.0.0 (11920) Mac.

              People

              • Assignee:
                Unassigned
                Reporter:
                alyssa Alyssa Gulledge (Inactive)
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                Dates

                • Created:
                  Updated:
                  Resolved: