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  1. Bug Repository
  2. BUG-300

Wrong name of graph file from Das2

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None

            Description

            When I load a graph file from Das2, it sets extension as a human name instead of feature name provided by das2.

            To reproduce
            1) Go Arabidopsis thaliana, A_thaliana_Jun_2009
            2) Then from Bioviz(Das2) server select AtTile1R > GSE9646 > 10h_ABA > GSM243689
            3) Region In View, Refresh Data
            4) Track shows name to be '.bar' instead of 'AtTile1R/GSE9646/10h_ABA/GSM243689'

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                Issue Links

                relates to

                Task - A task that needs to be done. BUG-647 Server bugs

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  hiralv Hiral Vora (Inactive) created issue -
                  Permalink
                  lfrohman Lance Frohman (Inactive) logged work - 25/Apr/11 9:23 AM
                  • Time Spent:
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                    should be corrected by svn revision 8060

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                  lfrohman Lance Frohman (Inactive) added a comment -

                  should be corrected by svn revision 8060

                  Show
                  lfrohman Lance Frohman (Inactive) added a comment - should be corrected by svn revision 8060
                  lfrohman Lance Frohman (Inactive) made changes -
                  Field Original Value New Value
                  issue.field.resolutiondate 2011-04-25 13:24:10.0 2011-04-25 13:24:10.768
                  Remaining Estimate 0 minutes [ 0 ]
                  Time Spent 10 minutes [ 600 ]
                  Worklog Id 10001 [ 10001 ]
                  lfrohman Lance Frohman (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Fix causes another know bug.
                  If you have two bar files with same name but at different location then it merges them into one track.

                  To reproduce :
                  1) Go to trunk/genometryImpl/test/data/bar
                  2) Create a new folder
                  3) Copy 'small.bar' into it.
                  4) Open both the files. (Species and version are irrelevant)

                  On 6.5 it creates different track while on trunk it merges them onto one track.

                  Show
                  hiralv Hiral Vora (Inactive) added a comment - Fix causes another know bug. If you have two bar files with same name but at different location then it merges them into one track. To reproduce : 1) Go to trunk/genometryImpl/test/data/bar 2) Create a new folder 3) Copy 'small.bar' into it. 4) Open both the files. (Species and version are irrelevant) On 6.5 it creates different track while on trunk it merges them onto one track.
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  Assignee Lance Frohman [ lfrohman ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB6.6 [ 10021 ] Bug Repository [ 10030 ]
                  Key IGBA-46 BUG-300
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Fuquan Wang [ fwang4 ]
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                  fwang4 Fuquan Wang (Inactive) added a comment - - edited

                  Passed on 7.0.0 (11884) Mac for the bug in description.

                  Not tested for the new bug, no idea where to find 'trunk/genometryImpl/test/data/bar'.

                  Show
                  fwang4 Fuquan Wang (Inactive) added a comment - - edited Passed on 7.0.0 (11884) Mac for the bug in description. Not tested for the new bug, no idea where to find 'trunk/genometryImpl/test/data/bar'.
                  fwang4 Fuquan Wang (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Fuquan Wang [ fwang4 ]
                  Resolution Fixed [ 1 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue is blocked by BUG-638 [ BUG-638 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue is blocked by BUG-638 [ BUG-638 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-647 [ BUG-647 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]

                    People

                    • Assignee:
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                      Reporter:
                      hiralv Hiral Vora (Inactive)
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