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  1. Bug Repository
  2. BUG-92

Start and Stop green and red boxes appear OUTSIDE of the sequence if an individual exon is selected

          Details

          • Type: Bug
          • Status: Closed (View Workflow)
          • Priority: Major
          • Resolution: Fixed
          • Labels:
            None

            Description

            open A thal, tair 10. Got to AT1G54080.1
            select the 2nd exon from left. Observe red stop codon in viewer, outside of sequence.
            Go to any other multi-exon gene and click the exon just before the last or just after the first - the red and green boxes appear in the image (see attached pictures)

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                Issue Links

                relates to

                Task - A task that needs to be done. BUG-608 Sequence viewer bugs

                • Blocker - Blocks development and/or testing work, production could not run.
                • Closed

                  Activity

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                  alyssa Alyssa Gulledge (Inactive) created issue -
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                  vbishnoi vbishnoi added a comment -

                  Resolved.
                  Thanks

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                  vbishnoi vbishnoi added a comment - Resolved. Thanks
                  vbishnoi vbishnoi made changes -
                  Field Original Value New Value
                  Assignee vikram bishnoi [ vbishnoi ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Open [ 1 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Project IGB6.5 [ 10010 ] Bug Repository [ 10030 ]
                  Key IGB-131 BUG-92
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
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                  david David Norris (Inactive) added a comment -

                  This bug is not fixed

                  open A thal, tair 10. Got to AT1G54040.2 (Note not AT1G54080.1 as was described in previous bug report)
                  select the 2nd exon from left. Observe red stop codon in viewer, outside of sequence.
                  Go to any other multi-exon gene and click the exon just before the last or just after the first - the red and green boxes appear in the image (see attached pictures)

                  Show
                  david David Norris (Inactive) added a comment - This bug is not fixed open A thal, tair 10. Got to AT1G54040.2 (Note not AT1G54080.1 as was described in previous bug report) select the 2nd exon from left. Observe red stop codon in viewer, outside of sequence. Go to any other multi-exon gene and click the exon just before the last or just after the first - the red and green boxes appear in the image (see attached pictures)
                  david David Norris (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ] Hiral Vora [ hiralv ]
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                  hiralv Hiral Vora (Inactive) added a comment -

                  Seems to be working. Can you test it?

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                  hiralv Hiral Vora (Inactive) added a comment - Seems to be working. Can you test it?
                  hiralv Hiral Vora (Inactive) made changes -
                  Assignee Hiral Vora [ hiralv ] Alyssa Gulledge [ alyssa ]
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                  david David Norris (Inactive) added a comment -

                  The gene I meant to point you to was AT1G27840.2; however, my second test did not reproduce this bug.

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                  david David Norris (Inactive) added a comment - The gene I meant to point you to was AT1G27840.2; however, my second test did not reproduce this bug.
                  david David Norris (Inactive) made changes -
                  Assignee Alyssa Gulledge [ alyssa ]
                  david David Norris (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Resolution Fixed [ 1 ]
                  david David Norris (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Katharine Kubiak [ kkubiak ]
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                  kkubiak Katharine Kubiak (Inactive) added a comment -

                  Passed v9824 Windows

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                  kkubiak Katharine Kubiak (Inactive) added a comment - Passed v9824 Windows
                  kkubiak Katharine Kubiak (Inactive) made changes -
                  Assignee Katharine Kubiak [ kkubiak ] Anuj Puram [ anuj ]
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                  anuj Anuj Puram (Inactive) added a comment -

                  Passed version 6.7.0 (9824) on Mac

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                  anuj Anuj Puram (Inactive) added a comment - Passed version 6.7.0 (9824) on Mac
                  anuj Anuj Puram (Inactive) made changes -
                  Assignee Anuj Puram [ anuj ] Alyssa Gulledge [ alyssa ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Alyssa Gulledge [ alyssa ]
                  Resolution Fixed [ 1 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Resolved [ 5 ] Closed [ 6 ]
                  smylapur Vineeth Mylapur (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Closed [ 6 ] Reopened [ 4 ]
                  Assignee Vineeth Mylapur [ smylapur ]
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                  smylapur Vineeth Mylapur (Inactive) added a comment -

                  Passed 7.0 v(11908) Windows

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                  smylapur Vineeth Mylapur (Inactive) added a comment - Passed 7.0 v(11908) Windows
                  smylapur Vineeth Mylapur (Inactive) made changes -
                  Status Reopened [ 4 ] Resolved [ 5 ]
                  Assignee Vineeth Mylapur [ smylapur ]
                  Resolution Fixed [ 1 ]
                  richard Richard Linchangco (Inactive) made changes -
                  Resolution Fixed [ 1 ]
                  Status Resolved [ 5 ] Reopened [ 4 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Link This issue relates to BUG-608 [ BUG-608 ]
                  alyssa Alyssa Gulledge (Inactive) made changes -
                  Status Reopened [ 4 ] Closed [ 6 ]
                  Resolution Fixed [ 1 ]

                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      alyssa Alyssa Gulledge (Inactive)
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                      Dates

                      • Created:
                        Updated:
                        Resolved: