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  1. Bug Repository
  2. BUG-608

Sequence viewer bugs

          Details

          • Type: Task
          • Status: Closed (View Workflow)
          • Priority: Blocker
          • Resolution: Fixed
          • Labels:
            None

            Description

            Host issue for Sequence viewer bugs:

            This should be closed after all linked bugs and tasks have been tested.

              Attachments

                Issue Links

                is blocked by

                Task - A task that needs to be done. BUG-621 GUI Test: Sequence Viewer

                • Major - Major loss of function.
                • Closed
                relates to

                Bug - A problem which impairs or prevents the functions of the product. BUG-26 Sequence viewer can be made to select past the end of the sequence.

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-38 Sequence viewer window title needs to show chromosome number when genomic sequence is selected

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-40 Sequence viewer loses start and stop codon indicators (green and red box) when you change colors

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-85 Sequence viewer cannot open the sequence for the - strand off of ENSEMBL server data

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-91 "Error loading residues" error using 'Show Genomic Sequence' on cytobands

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-92 Start and Stop green and red boxes appear OUTSIDE of the sequence if an individual exon is selected

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-93 Opening sequence viewer from the Bioviz quickload only produces dashes in the viewer, even though the sequence loads fine into the main window

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-122 Sequence Viewer reverse compliment doesn't assign the correct color to the start and stop 'boxes'

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-180 problem with genomic sequence viewer on IGB 6.6 release

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-410 Can not view highlighted sequence in sequence viewer

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-555 Seq Viewer not recognizing 'parent' read when a deletion is in the middle

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-564 can't right-click to get sequence viewer option

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-571 please add ability to copy protein sequence

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-598 View Read Sequence in sequence viewer of INSERTED short reads is completely wrong

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-611 Sequence viewer title bar is empty for genomic sequence and incorrect for cytobands

                • Major - Major loss of function.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-39 Sequence viewer should have 'Show cDNA only' button grayed out when NON-gene model sequence is being viewed

                • Minor - Minor loss of function, or other problem where easy workaround is present.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-249 bad error message for Sequence Viewer

                • Minor - Minor loss of function, or other problem where easy workaround is present.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-339 Sequence viewer layout needs some adjustment

                • Minor - Minor loss of function, or other problem where easy workaround is present.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-110 Sequence Viewer Resizing Problem

                • Trivial - Cosmetic problem like misspelt words or misaligned text.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-324 Sequence Viewer left margin incorrect when showing a single nucleotide

                • Trivial - Cosmetic problem like misspelt words or misaligned text.
                • Closed

                Bug - A problem which impairs or prevents the functions of the product. BUG-629 Sequence Viewer color change to 'Blue on White' and resizing of window leaves black background on right of window

                • Major - Major loss of function.
                • Closed

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                    People

                    • Assignee:
                      Unassigned
                      Reporter:
                      alyssa Alyssa Gulledge (Inactive)
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                      Dates

                      • Created:
                        Updated:
                        Resolved: