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  1. Deep Backlog
  2. DB-130

Edge-matching is being randomly selective (for Fruit Fly Gene Model)

    Details

    • Type: Bug
    • Status: Open (View Workflow)
    • Priority: Major
    • Resolution: Unresolved
    • Labels:
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      Description

      *Version noticed: 8.2.0

      THIS ISSUE WAS ONLY NOTICED FOR 1 GENE ONLY SO FAR!
      (but still, what is it about this gene that causes the edge-matching to display inappropriately?)

      *From Ivory:
      IGB is being randomly selective about what edges to highlight.
      See attached images EdgeMapA and B. Depending on which feature is selected, the edge mapping indicates that only some of the exons shown are the same (A) or that all exons shown are the same (B).

      To see more instances of inconsistent edge matching in a case where you would really want to be able to use edge mapping, see this region: 3R:21,350,072-21,378,314
      In the latest fruit fly genome (Drosophila melanogaster).

        Attachments

        1. EdgeMapA.png
          72 kB
          Mason Meyer
        2. EdgeMapB.png
          72 kB
          Mason Meyer

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              • Assignee:
                dcnorris David Norris (Inactive)
                Reporter:
                mason Mason Meyer (Inactive)
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                Dates

                • Created:
                  Updated: