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  1. Deep Backlog
  2. DB-141

Test and Resolve flaws in Genome View

          Details

          • Type: Task
          • Status: Open (View Workflow)
          • Priority: Major
          • Resolution: Unresolved
          • Labels:
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            Description

            This story was created to serve as a a reminder for the task of testing Genome View in IGB to determine flaws.

            This code may be rewritten/refactored in the near future and we should figure out what issues there are and the limitations/bottlenecks of genome view.

            Things to check:

            1) Bottlenecks of Genome View while loading several "chromosomes" (this may be related to available RAM)

            2) Find "traps" in Genome View and create JIRA stories for what needs to be fixed/optimized.

            3) What are the ways in which Genome View is used and how can it be optimized?

            *Place additional notes here or in comments below.

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                mason Mason Meyer (Inactive) added a comment -

                Issues found:

                -Thick Start and Stop visualization issues
                -Selection info coordinates system (using genome coordinates or chromosome coordinates)

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                mason Mason Meyer (Inactive) added a comment - Issues found: -Thick Start and Stop visualization issues -Selection info coordinates system (using genome coordinates or chromosome coordinates)
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                ann.loraine Ann Loraine added a comment -

                This is a lower priority than the other issues - I'm removing it from 8.4 release.

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                ann.loraine Ann Loraine added a comment - This is a lower priority than the other issues - I'm removing it from 8.4 release.
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                ann.loraine Ann Loraine added a comment -

                This is a low priority.

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                ann.loraine Ann Loraine added a comment - This is a low priority.

                  People

                  • Assignee:
                    mason Mason Meyer (Inactive)
                    Reporter:
                    mason Mason Meyer (Inactive)
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                    Dates

                    • Created:
                      Updated: