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  1. Deep Backlog
  2. DB-141

Test and Resolve flaws in Genome View

          Details

          • Type: Task
          • Status: Open (View Workflow)
          • Priority: Major
          • Resolution: Unresolved
          • Labels:
            None

            Description

            This story was created to serve as a a reminder for the task of testing Genome View in IGB to determine flaws.

            This code may be rewritten/refactored in the near future and we should figure out what issues there are and the limitations/bottlenecks of genome view.

            Things to check:

            1) Bottlenecks of Genome View while loading several "chromosomes" (this may be related to available RAM)

            2) Find "traps" in Genome View and create JIRA stories for what needs to be fixed/optimized.

            3) What are the ways in which Genome View is used and how can it be optimized?

            *Place additional notes here or in comments below.

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                mason Mason Meyer (Inactive) created issue -
                mason Mason Meyer (Inactive) made changes -
                Field Original Value New Value
                Epic Link IGBF-526 [ 15589 ]
                mason Mason Meyer (Inactive) made changes -
                Issue Type Bug [ 1 ] Task [ 3 ]
                mason Mason Meyer (Inactive) made changes -
                Status Open [ 1 ] Needs Testing [ 10002 ]
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                mason Mason Meyer (Inactive) added a comment -

                Issues found:

                -Thick Start and Stop visualization issues
                -Selection info coordinates system (using genome coordinates or chromosome coordinates)

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                mason Mason Meyer (Inactive) added a comment - Issues found: -Thick Start and Stop visualization issues -Selection info coordinates system (using genome coordinates or chromosome coordinates)
                dcnorris David Norris (Inactive) made changes -
                Sprint Sprint 16 [ 21 ]
                dcnorris David Norris (Inactive) made changes -
                Sprint Sprint 17 [ 22 ]
                dcnorris David Norris (Inactive) made changes -
                Rank Ranked higher
                mason Mason Meyer (Inactive) made changes -
                Sprint Sprint 17 [ 22 ]
                mason Mason Meyer (Inactive) made changes -
                Sprint Sprint 18 [ 23 ]
                mason Mason Meyer (Inactive) made changes -
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                ann.loraine Ann Loraine added a comment -

                This is a lower priority than the other issues - I'm removing it from 8.4 release.

                Show
                ann.loraine Ann Loraine added a comment - This is a lower priority than the other issues - I'm removing it from 8.4 release.
                ann.loraine Ann Loraine made changes -
                Epic Link IGBF-526 [ 15589 ] IGBF-497 [ 15559 ]
                dcnorris David Norris (Inactive) made changes -
                Sprint Sprint 18 [ 23 ]
                dcnorris David Norris (Inactive) made changes -
                Sprint Sprint 19 [ 24 ]
                dcnorris David Norris (Inactive) made changes -
                Rank Ranked higher
                mason Mason Meyer (Inactive) made changes -
                Sprint Sprint 19 [ 24 ]
                mason Mason Meyer (Inactive) made changes -
                Rank Ranked lower
                dcnorris David Norris (Inactive) made changes -
                Rank Ranked higher
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                ann.loraine Ann Loraine added a comment -

                This is a low priority.

                Show
                ann.loraine Ann Loraine added a comment - This is a low priority.
                ann.loraine Ann Loraine made changes -
                Project IGB [ 10840 ] Deep Backlog [ 11041 ]
                Key IGBF-527 DB-141
                Workflow Loraine Lab Workflow [ 15794 ] jira [ 16848 ]
                Status Needs Testing [ 10002 ] Open [ 1 ]

                  People

                  • Assignee:
                    mason Mason Meyer (Inactive)
                    Reporter:
                    mason Mason Meyer (Inactive)
                  • Votes:
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                    Dates

                    • Created:
                      Updated: