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  1. IGB
  2. IGBF-1057

insertions not shown correctly in IGB 8.5.1

        Details

        • Story Points:
          0.25
        • Sprint:
          Sprint 30

          Description

          Insertion Glyph bases are not being shown correctly.

          The Glyph is black (correct) but the bases are no longer being shown.

          To repeat:

          1) Visit S. lycopersicum (tomato) genome
          2) Select chromosome chrC-NC_007898.3
          3) Select a dataset from Plastid Resequencing folder (not Primers or Amplicon - choose one of the others)
          4) Zoom in, load data
          5) Zoom in further, look for black insertion Glyphs
          6) Observe that bases are not being shown.

          What should happen is that bases flanking the insertion site should be displayed on top of the black glyph.

            Attachments

              Issue Links

              is duplicated by

              Bug - A problem which impairs or prevents the functions of the product. IGBF-885 Change Insertion glyph color and shape

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                ann.loraine Ann Loraine created issue -
                ann.loraine Ann Loraine made changes -
                Field Original Value New Value
                Link This issue relates to IGBF-885 [ IGBF-885 ]
                mason Mason Meyer (Inactive) made changes -
                Attachment Insertions8_5_1.png [ 13250 ]
                mason Mason Meyer (Inactive) made changes -
                Link This issue is duplicated by IGBF-885 [ IGBF-885 ]
                mason Mason Meyer (Inactive) made changes -
                Link This issue relates to IGBF-885 [ IGBF-885 ]
                mason Mason Meyer (Inactive) made changes -
                Link This issue duplicates IGBF-885 [ IGBF-885 ]
                mason Mason Meyer (Inactive) made changes -
                Link This issue duplicates IGBF-885 [ IGBF-885 ]
                mason Mason Meyer (Inactive) made changes -
                Attachment InsertionBasesOffset.png [ 13255 ]
                dcnorris David Norris (Inactive) made changes -
                Status Open [ 1 ] Needs Testing [ 10002 ]
                mason Mason Meyer (Inactive) made changes -
                Assignee David Norris [ dcnorris ] Mason Meyer [ mason ]
                mason Mason Meyer (Inactive) made changes -
                Status Needs Testing [ 10002 ] Testing In Progress [ 10003 ]
                mason Mason Meyer (Inactive) made changes -
                Rank Ranked higher
                dcnorris David Norris (Inactive) made changes -
                Fix Version/s 8.5.2 MInor Release [ 10200 ]
                dcnorris David Norris (Inactive) made changes -
                Assignee Mason Meyer [ mason ] Tarun Mall [ tmall ]
                mason Mason Meyer (Inactive) made changes -
                Assignee Tarun Mall [ tmall ] Mason Meyer [ mason ]
                mason Mason Meyer (Inactive) made changes -
                Attachment InsertionsFinal.png [ 13258 ]
                Attachment VCF_Insertion.png [ 13259 ]
                mason Mason Meyer (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Testing In Progress [ 10003 ] Closed [ 6 ]
                mason Mason Meyer (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Closed [ 6 ] Open [ 1 ]
                mason Mason Meyer (Inactive) made changes -
                Labels File_Formats
                mason Mason Meyer (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Open [ 1 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Workflow Loraine Lab Workflow [ 16921 ] Fall 2019 Workflow Update [ 19740 ]
                ann.loraine Ann Loraine made changes -
                Workflow Fall 2019 Workflow Update [ 19740 ] Revised Fall 2019 Workflow Update [ 21859 ]

                  People

                  • Assignee:
                    mason Mason Meyer (Inactive)
                    Reporter:
                    ann.loraine Ann Loraine
                  • Votes:
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                    Watchers:
                    2 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: