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  1. IGB
  2. IGBF-1147

better bedgraph formatting

        Details

        • Type: Bug
        • Status: In Progress (View Workflow)
        • Priority: Major
        • Resolution: Unresolved
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          -IGB live does produce the duplicated lines. (see * below)
          -The lines are not (strictly) ordered. (See **)

          Chr1 8227506 8227522 2.0
          Chr1 8227506 8227522 2.0 *
          Chr1 8227534 8227542 5.0
          Chr1 8227534 8227542 5.0
          Chr1 8227542 8227553 6.0
          Chr1 8227534 8227542 5.0
          Chr1 20998229 20998235 5.0
          Chr1 20998235 20998333 0.0
          Chr1 8227506 8227522 2.0 **

          For some downstream use cases, non-overlap and being sorted are required, or at least desired.

            Attachments

              Issue Links

              relates to

              Bug - A problem which impairs or prevents the functions of the product. IGBF-2197 Investigate: Graph files grayed out

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • To-Do

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-1090 Implement saving of all chromosomes when exporting as bedgraph

              • Major - Major loss of function.
              • Closed

                Activity

                No work has yet been logged on this issue.

                  People

                  • Assignee:
                    Unassigned
                    Reporter:
                    ieclabau Ivory Blakley (Inactive)
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated: