Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Minor
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 9.0.1 Minor Release
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Labels:None
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Sprint:Fall 2017
Description
When saving a graph track there are two file type options: .gr or .bedgraph.
You select one from a pull down menu.
When the save track window comes up, one of them is already selected (the default).
But which one? its seems to be a random pick every time.
Its not consistently the same one I most recently used (which would be ideal)
And its not consistently the recommend one (which would be unideal but acceptable).
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That is odd. Perhaps try a fresh install of IGB 9.0.0, just to be sure that you are testing it on the live bioviz.org IGB, and not the main master IGB (both of which show version 9.0.0).
Not mind-blowing or anything, but that's all I can think of. I've seen the random-choice on every machine I've looked at (my mac, my windows, Jenn's linux).
@Ivory:
I started testing this issue by trying to reproduce the original problem on IGB 9.0.0, however, I was not able to do so. I tried several different files and used the method of hitting Ctrl "S" to quickly bring up the save menu and then selecting cancel but I always saw "BED" come up for annotations and "BEDGRAPH" come up for graphs; I never saw "BED_Detail" or "Gr" come up first. The issue is functioning as expected, but I feel uncomfortable closing an issue when I was not able to reproduce the original problem. Any idea on why I am not able to do this? I tested on Windows and Mac, by the way. Please let me know if you have any advice on this.
I'm reassigned this issue to Ann so she can look at the pull request.
I rebased from main master and created a pull request.
The graph file extension options are .gr and .bedgraph.
The value when the pop up window opens is randomly picked between those.
Likewise, in saving annotation files,
The annotation file options are bed (.bed) or bed detail (.bed).
The value when the pop up window opens is randomly picked between those.
After testing this issue it appears that the story is resolved:
*Save As... file extension drop down menu showed 'BED (bed)' first when saving an annotation, and 'Graph (bedgraph)' first when saving a graph, as expected.
*All four choices saved files successfully ( BED (bed), bed detail (bed), Graph (bedgraph), Graph (gr) )
*There seems to be no additional behavior caused by this code change.
Since the issue is resolved, it will now be closed.