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  1. IGB
  2. IGBF-1477

Improve galaxy bridge code - first draft

    Details

    • Type: Improvement
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
    • Story Points:
      3
    • Sprint:
      Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep

      Description

      Previously, Ann Loraine re-factored the BAR-to-IGB bridge code - bar.js and bar.html, deployed on Bioviz.org

      The refactored code works well and so far we have not had any problems.

      We also have code used to link the Galaxy system to IGB - galaxy.html and galaxy.js.

      For this task, re-factor the code and the structure of the page to match changes made to bar.js and bar.html.

      The code repository and instructions on how to deploy BioViz.org are here: https://bitbucket.org/lorainelab/bioviz

        Attachments

        1. ErrorPageMockup.png
          ErrorPageMockup.png
          383 kB
        2. Flowchart.jpg
          Flowchart.jpg
          87 kB
        3. Success page.JPG
          Success page.JPG
          101 kB
        4. SuccessPageMockup.png
          SuccessPageMockup.png
          287 kB
        5. Updated1.JPG
          Updated1.JPG
          82 kB
        6. VersionNotPresentError.JPG
          VersionNotPresentError.JPG
          116 kB

          Issue Links

            Activity

            aloraine Ann Loraine created issue -
            aloraine Ann Loraine made changes -
            Field Original Value New Value
            Assignee Ann Loraine [ aloraine ]
            aloraine Ann Loraine made changes -
            Workflow Loraine Lab Workflow [ 18192 ] Fall 2019 Workflow Update [ 18926 ]
            aloraine Ann Loraine made changes -
            Workflow Fall 2019 Workflow Update [ 18926 ] Revised Fall 2019 Workflow Update [ 21052 ]
            Status Open [ 1 ] To-Do [ 10305 ]
            aloraine Ann Loraine made changes -
            Epic Link IGBF-1880 [ 17970 ]
            aloraine Ann Loraine made changes -
            Link This issue relates to IGBF-1218 [ IGBF-1218 ]
            aloraine Ann Loraine made changes -
            Link This issue is blocked by IGBF-1487 [ IGBF-1487 ]
            aloraine Ann Loraine made changes -
            Rank Ranked higher
            aloraine Ann Loraine made changes -
            Story Points 2 3
            aloraine Ann Loraine made changes -
            Description Previously, Dr. Loraine re-factored the BAR-to-IGB bridge code - bar.js and bar.html, deployed on Bioviz.org

            The refactored code works well and so far we have not had any problems.

            We also have code used to link the Galaxy system to IGB - galaxy.html and galaxy.js.

            For this task, re-factor the code and the structure of the page to match changes made to bar.js and bar.html.

            The code repository and instructions on how to deploy BioViz.org are here: https://bitbucket.org/lorainelab/bioviz
            Previously, [~aloraine] re-factored the BAR-to-IGB bridge code - bar.js and bar.html, deployed on Bioviz.org

            The refactored code works well and so far we have not had any problems.

            We also have code used to link the Galaxy system to IGB - galaxy.html and galaxy.js.

            For this task, re-factor the code and the structure of the page to match changes made to bar.js and bar.html.

            The code repository and instructions on how to deploy BioViz.org are here: https://bitbucket.org/lorainelab/bioviz
            aloraine Ann Loraine made changes -
            Sprint Summer 6: 17 Aug - 28 Aug [ 101 ]
            Labels Intermediate
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Assignee Shamika Gajanan Kulkarni [ shamika ]
            aloraine Ann Loraine made changes -
            Sprint Summer 6: 17 Aug - 28 Aug [ 101 ] Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep [ 101, 102 ]
            aloraine Ann Loraine made changes -
            Rank Ranked higher
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Assignee Shamika Gajanan Kulkarni [ shamika ] Ann Loraine [ aloraine ]
            aloraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ] Shamika Gajanan Kulkarni [ shamika ]
            aloraine Ann Loraine made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            aloraine Ann Loraine made changes -
            Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Attachment VersionNotPresentError.JPG [ 14855 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Assignee Shamika Gajanan Kulkarni [ shamika ] Ann Loraine [ aloraine ]
            aloraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ] Shamika Gajanan Kulkarni [ shamika ]
            aloraine Ann Loraine made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            aloraine Ann Loraine made changes -
            Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Attachment Updated1.JPG [ 14856 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Assignee Shamika Gajanan Kulkarni [ shamika ] Ann Loraine [ aloraine ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Attachment Success page.JPG [ 14858 ]
            rweidenh Logan Weidenhammer (Inactive) made changes -
            Attachment SuccessPageMockup.png [ 14859 ]
            Attachment ErrorPageMockup.png [ 14860 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Attachment Flowchart.jpg [ 14861 ]
            aloraine Ann Loraine made changes -
            Sprint Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep [ 101, 102 ] Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep [ 101, 102, 103 ]
            aloraine Ann Loraine made changes -
            Rank Ranked higher
            aloraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ] Shamika Gajanan Kulkarni [ shamika ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            aloraine Ann Loraine made changes -
            Summary Improve galaxy bridge code Improve galaxy bridge code - first draft
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            shamika Shamika Gajanan Kulkarni (Inactive) made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

              People

              • Assignee:
                shamika Shamika Gajanan Kulkarni (Inactive)
                Reporter:
                aloraine Ann Loraine
              • Votes:
                0 Vote for this issue
                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: