Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-1632

IGB-CyVerse load data without genome

        Details

        • Type: New Feature
        • Status: Closed (View Workflow)
        • Priority: Blocker
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Situation: The IGB-CyVerse bridge uses similar logic to BAR/Galaxy. However, CyVerse does not assume there is genome metadata associated with data.

          Task: Update code in IGB to allow for non-genome associated data from CyVerse.

          Important file: BookmarkUnibrowControlServlet.java
          Important method: loadUnknownData

          Note: Will need to make sure does not break the Galaxy/BAR logic.
          Note: At some point we need to refactor the servlet code used by Galaxy/BAR/CyVerse.

            Attachments

              Issue Links

              relates to

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-1635 Develop a strategy to refactor REST endpoint code used by Galaxy/BAR/CyVerse (maybe AppStore)

              • Major - Major loss of function.
              • Closed

                Activity

                No work has yet been logged on this issue.

                  People

                  • Assignee:
                    stiwari8 Srishti Tiwari (Inactive)
                    Reporter:
                    nfreese Nowlan Freese
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: