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  1. IGB
  2. IGBF-1799

Integrate View in IGB UI with REST apis

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          4
        • Epic Link:
        • Sprint:
          Summer 2019 Sprint 8, Summer 2019 Sprint 9, Summer 2019 Sprint 10, Summer 2019 Sprint 11, Summer 2019 Sprint 12, Fall 2019 Sprint 1, Fall 2019 Sprint 2, Fall 2019 Sprint 3

          Description

          Situation: In the BioViz-CyVerse web app, when a user clicks on the View in IGB button, the URL to the public data and any IGB-specific metadata should be sent to the IGB REST endpoint.

          Task: Configure BioViz-CyVerse web app to send the public URL and IGB-specific metadata to the IGB REST endpoint.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-2066 Define CyVerse REST calls to be handled by IGB REST endpoint(s)

              • Major - Major loss of function.
              • Closed

                Activity

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                chaitanya Chaitanya Kintali (Inactive) added a comment -

                Working as Expected. Moving to Done.
                Steps in Testing:
                ------------------------
                1) Open Integrated Genome Browser
                2) Select any Private file from cyverse page and click on the 'View in IGB' button
                3) An Error Message pops up, since the file is private.
                4) Make the File public by manage link -> Create public link
                5) Click 'View in IGB'.
                6) I can see the file in IGB.
                7) tested across .bam, bed files

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                chaitanya Chaitanya Kintali (Inactive) added a comment - Working as Expected. Moving to Done. Steps in Testing: ------------------------ 1) Open Integrated Genome Browser 2) Select any Private file from cyverse page and click on the 'View in IGB' button 3) An Error Message pops up, since the file is private. 4) Make the File public by manage link -> Create public link 5) Click 'View in IGB'. 6) I can see the file in IGB. 7) tested across .bam, bed files
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                ann.loraine Ann Loraine added a comment -

                For the next steps, define all REST calls needed to be handled by IGB REST endpoint(s).

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                ann.loraine Ann Loraine added a comment - For the next steps, define all REST calls needed to be handled by IGB REST endpoint(s).
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                nfreese Nowlan Freese added a comment -

                Commit

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                nfreese Nowlan Freese added a comment - Commit

                  People

                  • Assignee:
                    pbole Pawan Bole (Inactive)
                    Reporter:
                    stiwari8 Srishti Tiwari (Inactive)
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                    Dates

                    • Created:
                      Updated:
                      Resolved: