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  1. IGB
  2. IGBF-199

Check that instructions for building FindJunctions (in tools directory) still work

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Check that a new user can easily check out, build, and run FindJunctions.

      • Follow instructions on bitbucket to clone the repo onto local computer
      • Read the README or other documentation in tools/FindJunctions
      • Follow the instructions to build and run FindJunctions

      Note: I couldn't find instructions on how to run the software. Probably we need to add this. Look on wiki and SourceForge to find instructions. If none are available, look carefully at the code to determine parameters, arguments, command line syntax, etc.

      For your reference, here is a simple script Ann uses to run FindJunctions on the cluster:

        Attachments

          Activity

          ann.loraine Ann Loraine created issue -
          ann.loraine Ann Loraine made changes -
          Field Original Value New Value
          Epic Link IGBF-99 [ 14534 ]
          ann.loraine Ann Loraine made changes -
          Rank Ranked higher
          ann.loraine Ann Loraine made changes -
          Story Points 0.5
          dcnorris David Norris (Inactive) made changes -
          Sprint Sprint 5 [ 10 ]
          dcnorris David Norris (Inactive) made changes -
          Rank Ranked higher
          tkanapar Tarun Santosh (Inactive) made changes -
          Status Open [ 1 ] In Progress [ 3 ]
          tkanapar Tarun Santosh (Inactive) made changes -
          Status In Progress [ 3 ] Open [ 1 ]
          tkanapar Tarun Santosh (Inactive) made changes -
          Status Open [ 1 ] In Progress [ 3 ]
          tkanapar Tarun Santosh (Inactive) made changes -
          Status In Progress [ 3 ] Closed [ 6 ]
          Resolution Fixed [ 1 ]
          ann.loraine Ann Loraine made changes -
          Workflow Loraine Lab Workflow [ 14923 ] Fall 2019 Workflow Update [ 19221 ]
          ann.loraine Ann Loraine made changes -
          Workflow Fall 2019 Workflow Update [ 19221 ] Revised Fall 2019 Workflow Update [ 21337 ]

            People

            • Assignee:
              tkanapar Tarun Santosh (Inactive)
              Reporter:
              ann.loraine Ann Loraine
            • Votes:
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              Watchers:
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              Dates

              • Created:
                Updated:
                Resolved: