Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:5
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Epic Link:
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Sprint:Spring 2 : 20 Jan to 31 Jan, Spring 3 : 3 Feb to 14 Feb, Spring 3 : 17 Feb to 28 Feb, Spring 4 : 2 Mar to 13 Mar, Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun, Summer 1: 8 Jun - 19 Jun, Summer 2: 22 Jun - 3 Jul, Summer 3: 6 Jul - 17 Jul
Description
When loading a bai file, if no bam file or its header is found, compare the bin sizes of the bai file to the chromosome lengths for the selected genome. Use this comparison to determine the order of the chromosomes. For example if the bin sizes are 16kbp, 32kbp, 64kbp and the chromosome sizes are Chr1:15kbp, Chr2:61kbp, and Chr3:32kbp, the order of the bai file must be Chr1, Chr3, Chr2. Use this to correctly order the chromosomes in the bai graph in IGB.