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  1. IGB
  2. IGBF-2249

Create stub classes for the project - parsing, models

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Critical
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
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          Description

          Create new "stub" classes for the project, using the design in IGBF-2247.

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              is blocked by

              Task - A task that needs to be done. IGBF-2247 Sketch code structure

              • Blocker - Blocks development and/or testing work, production could not run.
              • Closed

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                ann.loraine Ann Loraine added a comment - - edited

                To test, check that the stub classes can compile.
                To review, read the code and make note of any questions about the design and structure.

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                ann.loraine Ann Loraine added a comment - - edited To test, check that the stub classes can compile. To review, read the code and make note of any questions about the design and structure.
                Hide
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                ann.loraine Ann Loraine added a comment -

                Created:

                • plugins/GenotypingResults/src/main/java/org/lorainelab/igb/genotyping/GenotypeFileHandler.java
                • plugins/GenotypingResults/src/main/java/org/lorainelab/igb/genotyping/TwentyThreeAndMeSymLoader.java
                • data model - plugins/GenotypingResults/src/main/java/org/lorainelab/igb/genotyping/TwentyThreeAndMeVariationSym.java

                Added example data file:

                • plugins/GenotypingResults/src/test/resources/sample23andMe.23andMe

                Added pom.xml:

                • plugins/GenotypingResults/pom.xml

                Still to do:

                • Add TwentyThreeAndMeVariationGlyph.java - a subclass of Glyph that draws a TwentyThreeAndMeVariationSym.java
                • Add GenotypingResultsFactory.java - implements factory methods for adding above Glyphs to a SeqMapView
                Show
                ann.loraine Ann Loraine added a comment - Created: plugins/GenotypingResults/src/main/java/org/lorainelab/igb/genotyping/GenotypeFileHandler.java plugins/GenotypingResults/src/main/java/org/lorainelab/igb/genotyping/TwentyThreeAndMeSymLoader.java data model - plugins/GenotypingResults/src/main/java/org/lorainelab/igb/genotyping/TwentyThreeAndMeVariationSym.java Added example data file: plugins/GenotypingResults/src/test/resources/sample23andMe.23andMe Added pom.xml: plugins/GenotypingResults/pom.xml Still to do: Add TwentyThreeAndMeVariationGlyph.java - a subclass of Glyph that draws a TwentyThreeAndMeVariationSym.java Add GenotypingResultsFactory.java - implements factory methods for adding above Glyphs to a SeqMapView

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                  • Assignee:
                    ann.loraine Ann Loraine
                    Reporter:
                    ann.loraine Ann Loraine
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                    • Created:
                      Updated:
                      Resolved: