Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-2293

Enable right-click on one or more selected gene models to launch ProtAnnot

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          3
        • Epic Link:
        • Sprint:
          Spring 5 : 16 Mar to 27 Mar, Spring 6 : 30 Mar to Apr 10, Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun

          Description

          Currently, when users want to run ProtAnnot, they must select one or more gene models and then choose Tools > Start ProtAnnot.

          This is fine, but it would be even better if they could also select one or more gene models, right-click on the selected models to trigger a context menu, and then choose an option "Start ProtAnnot" from there.

          How this works:

          • An App can add an item to the right-click context menu by implementing org.lorainelab.igb.menu.api.AnnotationContextMenuProvider
          • The App must also declare this to be a service using standard SCR annotations

          As an example, see:

          U

            Attachments

              Issue Links

              is blocked by

              Improvement - An improvement or enhancement to an existing feature or task. IGBF-937 Make InterproScan default tab upon opening ProtAnnot

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                Hide
                Permalink
                shamika Shamika Gajanan Kulkarni (Inactive) added a comment -

                I have moved this to Current Sprint. I hope its okay to do so Prof. [~aloraine]

                Show
                shamika Shamika Gajanan Kulkarni (Inactive) added a comment - I have moved this to Current Sprint. I hope its okay to do so Prof. [~aloraine]
                Hide
                Permalink
                ann.loraine Ann Loraine added a comment -

                It is fine.

                Show
                ann.loraine Ann Loraine added a comment - It is fine.
                Hide
                Permalink
                shamika Shamika Gajanan Kulkarni (Inactive) added a comment -

                The changes as discussed are present in the link below.
                https://bitbucket.org/skulka2710/protannot-shamika/branch/IGBF-2293#diff
                Kindly review.

                Show
                shamika Shamika Gajanan Kulkarni (Inactive) added a comment - The changes as discussed are present in the link below. https://bitbucket.org/skulka2710/protannot-shamika/branch/IGBF-2293#diff Kindly review.
                Hide
                Permalink
                ann.loraine Ann Loraine added a comment -

                The code looks great. Please submit PR.

                Show
                ann.loraine Ann Loraine added a comment - The code looks great. Please submit PR.
                Hide
                Permalink
                shamika Shamika Gajanan Kulkarni (Inactive) added a comment -

                Thank you Prof. [~aloraine]. PR submitted.
                https://bitbucket.org/lorainelab/protannot/pull-requests/11/igbf-2293-enable-right-click-menu-entry/diff

                Show
                shamika Shamika Gajanan Kulkarni (Inactive) added a comment - Thank you Prof. [~aloraine] . PR submitted. https://bitbucket.org/lorainelab/protannot/pull-requests/11/igbf-2293-enable-right-click-menu-entry/diff
                Hide
                Permalink
                ann.loraine Ann Loraine added a comment -

                Merged to master branch.

                Show
                ann.loraine Ann Loraine added a comment - Merged to master branch.
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                Tested on Mac with 9.1.6 Jar

                Added https://bitbucket.org/lorainelab/protannot/downloads/ as new app repository.

                With ProtAnnot installed, able to right-click on gene model(s) and select Start ProtAnnot.

                Closing issue.

                Show
                nfreese Nowlan Freese added a comment - Tested on Mac with 9.1.6 Jar Added https://bitbucket.org/lorainelab/protannot/downloads/ as new app repository. With ProtAnnot installed, able to right-click on gene model(s) and select Start ProtAnnot. Closing issue.

                  People

                  • Assignee:
                    Unassigned
                    Reporter:
                    ann.loraine Ann Loraine
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: