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  1. IGB
  2. IGBF-2319

Improve Primer Options tab - minor changes

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
    • Story Points:
      2
    • Sprint:
      Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May, Spring 9 : 25 May to 8 Jun, Summer 1: 8 Jun - 19 Jun, Fall 5, Fall 6

      Description

      NCBI Primer App is a tool that helps users design PCR primers to amplify DNA.

      The UI works fine but some of the UI elements are poorly worded or consume too much space.

      To improve it, make the following changes to the NCBI Primer Options tab UI:

      • Move components closer to their labels
      • Change wording: "Number of Primers to return" to: "Return primers:"
      • Change wording:"Custom forward primer" to "Forward Primer" (same for Reverse primer)
      • Change wording: "PCR product size" to "Product size"
      • Remove label "Specificity check" (the checkbox text explains what this is about – the label is not really needed)
      • Change "Enable search ...to the intended PCR template" to: "Design primer pairs specific to the selected target"
      • Reduce the size of the "Database" dropdown

      See: https://bitbucket.org/lorainelab/ncbi-primer/src/master/
      Also see: https://drive.google.com/file/d/1hmdG4pKfSBFZ412Ew-ikHJoDvNptJ0RX/view?usp=sharing

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            jsirigin Jaya Sravani Sirigineedi added a comment -

            Will raise a PR once this issue https://jira.bioviz.org/browse/IGBF-3483 PR is merged as it will raise conflicts.

            Show
            jsirigin Jaya Sravani Sirigineedi added a comment - Will raise a PR once this issue https://jira.bioviz.org/browse/IGBF-3483 PR is merged as it will raise conflicts.
            Hide
            ann.loraine Ann Loraine added a comment -

            Attn Jaya Sravani Sirigineedi: Please submit PR as the test case improvement is now merged to the master branch.

            Show
            ann.loraine Ann Loraine added a comment - Attn Jaya Sravani Sirigineedi : Please submit PR as the test case improvement is now merged to the master branch.
            Show
            jsirigin Jaya Sravani Sirigineedi added a comment - PR has been raised: https://bitbucket.org/lorainelab/ncbi-primer/pull-requests/5
            Hide
            ann.loraine Ann Loraine added a comment - - edited

            The PR is merged and new artifact is built on the team repository.

            See: https://bitbucket.org/lorainelab/ncbi-primer/downloads/ for the new jar file newly available.

            Ready for testing.

            Show
            ann.loraine Ann Loraine added a comment - - edited The PR is merged and new artifact is built on the team repository. See: https://bitbucket.org/lorainelab/ncbi-primer/downloads/ for the new jar file newly available. Ready for testing.
            Hide
            nfreese Nowlan Freese added a comment -

            Tested on Mac
            Added app from https://bitbucket.org/lorainelab/ncbi-primer/downloads/
            Vertical and horizontal scroll bars are working well.
            Text appears correct, spacing looks good.
            App appears as 0.0.2

            Closing ticket.

            Show
            nfreese Nowlan Freese added a comment - Tested on Mac Added app from https://bitbucket.org/lorainelab/ncbi-primer/downloads/ Vertical and horizontal scroll bars are working well. Text appears correct, spacing looks good. App appears as 0.0.2 Closing ticket.

              People

              • Assignee:
                jsirigin Jaya Sravani Sirigineedi
                Reporter:
                ann.loraine Ann Loraine
              • Votes:
                0 Vote for this issue
                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: