Details
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Type:
New Feature
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May
Description
Currently, the BAI file reader is converting the BAI file to a temporary graph file, which is then getting read.
It would be far more efficient to simply read the file directly and create a GraphSym out of it.
For this task, modify the code to create a GraphSym instead of a BedGraph intermediate file. To do this, make a new SymLoader class that will be returned by the FileLoader class.
Attachments
Issue Links
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link |
|
| Rank | Ranked higher |
| Rank | Ranked higher |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Assignee | Pooja Nikhare [ pooja.nikhare ] |
| Description |
Currently, the BAI file reader is converting the BAI file to a temporary graph file, which is then getting read.
It would be far more efficient to simply read the file directly and create a GraphSym out of it. For this task, modify the code to create a GraphSym instead of a BedGraph intermediate file. |
Currently, the BAI file reader is converting the BAI file to a temporary graph file, which is then getting read.
It would be far more efficient to simply read the file directly and create a GraphSym out of it. For this task, modify the code to create a GraphSym instead of a BedGraph intermediate file. To do this, make a new SymLoader class that will be returned by the FileLoader class |
| Description |
Currently, the BAI file reader is converting the BAI file to a temporary graph file, which is then getting read.
It would be far more efficient to simply read the file directly and create a GraphSym out of it. For this task, modify the code to create a GraphSym instead of a BedGraph intermediate file. To do this, make a new SymLoader class that will be returned by the FileLoader class |
Currently, the BAI file reader is converting the BAI file to a temporary graph file, which is then getting read.
It would be far more efficient to simply read the file directly and create a GraphSym out of it. For this task, modify the code to create a GraphSym instead of a BedGraph intermediate file. To do this, make a new SymLoader class that will be returned by the FileLoader class. |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Pooja Nikhare [ pooja.nikhare ] |
| Sprint | Spring 7 : 13 Apr to 24 Apr [ 92 ] | Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May [ 92, 93 ] |
| Rank | Ranked higher |
| Sprint | Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May [ 92, 93 ] | Spring 7 : 13 Apr to 24 Apr, Spring 8 : 24 Apr to 8 May, Spring 8 : 11 May to 25 May [ 92, 93, 94 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Assignee | Pooja Nikhare [ pooja.nikhare ] |