Details
-
Type:
Task
-
Status: Closed (View Workflow)
-
Priority:
Major
-
Resolution: Done
-
Affects Version/s: None
-
Fix Version/s: None
-
Labels:None
-
Story Points:3
-
Epic Link:
-
Sprint:Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 3: Oct 12 - Oct 23
Description
Situation: Significant changes were made to how the bai sym loader work (IGBF-2329) as well as experimental changes to how bin sizes are calculated and applied to chromosomes (IGBF-2221).
Task: Need to review code changes and refactor code to simplify. For example, it looks like there are now two Java Class files that contain the same code (related to IGBF-2329). Need to determine why there are two classes and if one can be removed.
Need to clean up unnecessary code related to comparing bin sizes to chromosomes (IGBF-2221). After significant testing we determined this could not be accurately implemented. Need to remove any code that refers to it.
Need to double-check code used to determine average size of bins. The average size was originally determined by looping through the data twice. This was fixed in IGBF-2329, but need to make sure that the now unnecessary loop was removed.