Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-2539

On-Boarding: Step 0 - Module 1 of IGB course & running IGB

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None
    • Story Points:
      3
    • Sprint:
      Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15, Fall 3 2023 Oct 2, Fall 4, Fall 5

      Description

      Welcome to your first on-boarding task for the IGB core development team!

      We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

      For the next steps, please do the following tasks to get familiar with IGB and how it is used.

      Note that this issue has 3 story points.

      A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

      This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

      Reading:

      IGB on-line canvas course:

      IGB documentation:

      Get started using IGB:

      1. Download and install the current release of IGB onto your computer from https://bioviz.org/
      2. Click the “install IGB” button in the top right. (The appropriate version for your operating system should be supplied for you.)
      3. Click the button to download IGB for your computer
      4. Run the downloaded file
      5. Follow the instructions in the setup wizard.
      6. Open and run the Integrated Genome Browser software.
      7. The IGB Quickstart webpage will open automatically in your web browser.
      8. IGB may take several seconds to launch.
      9. Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
      10. Re-create the scene shown at the very end of the video.
      11. Then use the camera icon button in the IGB toolbar at the top, or go to File > Save Image to take a picture of IGB showing the scene at the end of the video;
      12. Upload that image here as an attachment (you can use the plus icon to the right of Attachments).
      13. Move the ticket to Needs 1st Level Review by clicking the Workflow dropdown button at the top (under the ticket name), and select Request Review. You could also drag the ticket over to the right one space from the Agile board > IGB > Work view.
      14. Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.

      Reviewers:

      • Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
      • Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
      • Confirm that the assignee has enrolled in the class. To do this select the People tab and look for the student’s name in the list.

        Attachments

        1. igb_1.0.png
          igb_1.0.png
          68 kB
        2. igb.png
          igb.png
          795 kB
        3. igb.png
          igb.png
          124 kB
        4. IGB.PNG
          IGB.PNG
          78 kB
        5. igb2.png
          igb2.png
          61 kB
        6. screenshot-1.png
          screenshot-1.png
          123 kB
        7. screenshot-2.png
          screenshot-2.png
          328 kB
        8. screenshot-3.png
          screenshot-3.png
          526 kB

          Issue Links

            Activity

            ann.loraine Ann Loraine created issue -
            ann.loraine Ann Loraine made changes -
            Field Original Value New Value
            Epic Link IGBF-1762 [ 17852 ]
            ann.loraine Ann Loraine made changes -
            Link This issue clones IGBF-2502 [ IGBF-2502 ]
            ann.loraine Ann Loraine made changes -
            Link This issue clones IGBF-2502 [ IGBF-2502 ]
            ann.loraine Ann Loraine made changes -
            Summary CLONE - On-Boarding: Step 0 - Module 1 of IGB course & running IGB On-Boarding: Step 0 - Module 1 of IGB course & running IGB
            ann.loraine Ann Loraine made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For this on-boarding task, please do the following:

            # Go to https://canvas.instructure.com and make a free account.
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            # Download and install the current release of IGB onto your computer.
            # Using IGB, copy the actions shown in this IGB video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Use the camera button in the IGB toolbar to take a picture of IGB showing the scene at the end of the video; upload it here

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following:

            # Go to https://canvas.instructure.com and make a free account.
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            # Download and install the current release of IGB onto your computer.
            # Using IGB, copy the actions shown in this IGB video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Use the camera button in the IGB toolbar to take a picture of IGB showing the scene at the end of the video; upload it here

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class.
            ann.loraine Ann Loraine made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following:

            # Go to https://canvas.instructure.com and make a free account.
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            # Download and install the current release of IGB onto your computer.
            # Using IGB, copy the actions shown in this IGB video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Use the camera button in the IGB toolbar to take a picture of IGB showing the scene at the end of the video; upload it here

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following:

            # Go to https://canvas.instructure.com and make a free account.
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            # Download and install the current release of IGB onto your computer.
            # Using IGB, copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Use the camera button in the IGB toolbar to take a picture of IGB showing the scene at the end of the video; upload it here

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class.
            rweidenh Logan Weidenhammer (Inactive) made changes -
            Link This issue blocks IGBF-1763 [ IGBF-1763 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Attachment igb.png [ 14880 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Attachment igb2.png [ 14881 ]
            ann.loraine Ann Loraine made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep [ 100, 101, 102, 103 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct [ 100, 101, 102, 103, 104 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Assignee Irvin Naylor [ inaylor ] Ann Loraine [ aloraine ]
            ann.loraine Ann Loraine made changes -
            Attachment igb.png [ 14880 ]
            ann.loraine Ann Loraine made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            ann.loraine Ann Loraine made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            ann.loraine Ann Loraine made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            ann.loraine Ann Loraine made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            ann.loraine Ann Loraine made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            ann.loraine Ann Loraine made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            ann.loraine Ann Loraine made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            ann.loraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ] Irvin Naylor [ inaylor ]
            rweidenh Logan Weidenhammer (Inactive) made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following:

            # Go to https://canvas.instructure.com and make a free account.
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            # Download and install the current release of IGB onto your computer.
            # Using IGB, copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Use the camera button in the IGB toolbar to take a picture of IGB showing the scene at the end of the video; upload it here

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following:

            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            #* Click on *Modules* on the left side and read the two introduction pages: *IGB Background* and *Intro to IGB Data Visualization*.
            # Download and install the current release of IGB onto your computer.
            #* To do this go to https://www.bioviz.org/
            #* Click the “install IGB” button in the top right
            #* The appropriate version for your operating system should be supplied for you
            #* If you need a different version, click the *Click here for other ways to download IGB* hyperlink to see downloadable versions of IGB for other operating systems.
            #* Click the button to download IGB for your computer
            #* Run the downloaded file
            #* Follow the instructions in the setup wizard.
            #* Open and run the Integrated Genome Browser software.
            #* The IGB Quickstart webpage will open automatically in your web browser.
            #* IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.


            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            ann.loraine Ann Loraine made changes -
            Resolution Done [ 10000 ]
            Status Closed [ 6 ] To-Do [ 10305 ]
            ann.loraine Ann Loraine made changes -
            Assignee Irvin Naylor [ inaylor ] Omkar Marne [ omarne ]
            ann.loraine Ann Loraine made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following:

            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            #* Click on *Modules* on the left side and read the two introduction pages: *IGB Background* and *Intro to IGB Data Visualization*.
            # Download and install the current release of IGB onto your computer.
            #* To do this go to https://www.bioviz.org/
            #* Click the “install IGB” button in the top right
            #* The appropriate version for your operating system should be supplied for you
            #* If you need a different version, click the *Click here for other ways to download IGB* hyperlink to see downloadable versions of IGB for other operating systems.
            #* Click the button to download IGB for your computer
            #* Run the downloaded file
            #* Follow the instructions in the setup wizard.
            #* Open and run the Integrated Genome Browser software.
            #* The IGB Quickstart webpage will open automatically in your web browser.
            #* IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.


            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            #* Click on *Modules* on the left side and read the two introduction pages: *IGB Background* and *Intro to IGB Data Visualization*.

            IGB documentation:
            # Visit the IGB user's guide and get familiar with all the contents: https://wiki.transvar.org/display/igbman/Home
            # Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.transvar.org/display/ITD/IGB+Release+Documentation
            # Visit the IGB Developers guide and get familiar with the contents: https://wiki.transvar.org/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            #* Click the “install IGB” button in the top right
            #* The appropriate version for your operating system should be supplied for you
            #* If you need a different version, click the *Click here for other ways to download IGB* hyperlink to see downloadable versions of IGB for other operating systems.
            #* Click the button to download IGB for your computer
            #* Run the downloaded file
            #* Follow the instructions in the setup wizard.
            #* Open and run the Integrated Genome Browser software.
            #* The IGB Quickstart webpage will open automatically in your web browser.
            #* IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.


            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            ann.loraine Ann Loraine made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            # Log in and enroll in https://canvas.instructure.com/courses/1164217
            # In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*
            #* Click on *Modules* on the left side and read the two introduction pages: *IGB Background* and *Intro to IGB Data Visualization*.

            IGB documentation:
            # Visit the IGB user's guide and get familiar with all the contents: https://wiki.transvar.org/display/igbman/Home
            # Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.transvar.org/display/ITD/IGB+Release+Documentation
            # Visit the IGB Developers guide and get familiar with the contents: https://wiki.transvar.org/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            #* Click the “install IGB” button in the top right
            #* The appropriate version for your operating system should be supplied for you
            #* If you need a different version, click the *Click here for other ways to download IGB* hyperlink to see downloadable versions of IGB for other operating systems.
            #* Click the button to download IGB for your computer
            #* Run the downloaded file
            #* Follow the instructions in the setup wizard.
            #* Open and run the Integrated Genome Browser software.
            #* The IGB Quickstart webpage will open automatically in your web browser.
            #* IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.


            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.transvar.org/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.transvar.org/display/ITD/IGB+Release+Documentation
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.transvar.org/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            #* Click the “install IGB” button in the top right
            #* The appropriate version for your operating system should be supplied for you
            #* If you need a different version, click the *Click here for other ways to download IGB* hyperlink to see downloadable versions of IGB for other operating systems.
            #* Click the button to download IGB for your computer
            #* Run the downloaded file
            #* Follow the instructions in the setup wizard.
            #* Open and run the Integrated Genome Browser software.
            #* The IGB Quickstart webpage will open automatically in your web browser.
            #* IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.


            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            ann.loraine Ann Loraine made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.transvar.org/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.transvar.org/display/ITD/IGB+Release+Documentation
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.transvar.org/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            #* Click the “install IGB” button in the top right
            #* The appropriate version for your operating system should be supplied for you
            #* If you need a different version, click the *Click here for other ways to download IGB* hyperlink to see downloadable versions of IGB for other operating systems.
            #* Click the button to download IGB for your computer
            #* Run the downloaded file
            #* Follow the instructions in the setup wizard.
            #* Open and run the Integrated Genome Browser software.
            #* The IGB Quickstart webpage will open automatically in your web browser.
            #* IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.


            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.transvar.org/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.transvar.org/display/ITD/IGB+Release+Documentation
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.transvar.org/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            # Click the “install IGB” button in the top right. (The appropriate version for your operating system should be supplied for you.)
            # Click the button to download IGB for your computer
            # Run the downloaded file
            # Follow the instructions in the setup wizard.
            # Open and run the Integrated Genome Browser software.
            # The IGB Quickstart webpage will open automatically in your web browser.
            # IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            ann.loraine Ann Loraine made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct [ 100, 101, 102, 103, 104 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5 [ 100, 101, 102, 103, 104, 113 ]
            omarne Omkar Marne (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            omarne Omkar Marne (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            omarne Omkar Marne (Inactive) made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            omarne Omkar Marne (Inactive) made changes -
            Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
            omarne Omkar Marne (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15138 ]
            omarne Omkar Marne (Inactive) made changes -
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            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15139 ]
            omarne Omkar Marne (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            ann.loraine Ann Loraine made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            ann.loraine Ann Loraine made changes -
            Assignee Omkar Marne [ omarne ] Ann Loraine [ aloraine ]
            ann.loraine Ann Loraine made changes -
            Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
            ann.loraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ] Omkar Marne [ omarne ]
            omarne Omkar Marne (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15139 ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15140 ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15140 ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15141 ]
            omarne Omkar Marne (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            omarne Omkar Marne (Inactive) made changes -
            Assignee Omkar Marne [ omarne ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Assignee Sai Supreeth Segu [ ssegu ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Assignee Sai Supreeth Segu [ ssegu ] Omkar Marne [ omarne ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15141 ]
            omarne Omkar Marne (Inactive) made changes -
            Attachment IGB.PNG [ 15142 ]
            omarne Omkar Marne (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            omarne Omkar Marne (Inactive) made changes -
            Assignee Omkar Marne [ omarne ]
            omarne Omkar Marne (Inactive) made changes -
            Status In Progress [ 3 ] To-Do [ 10305 ]
            omarne Omkar Marne (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            omarne Omkar Marne (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Assignee Sai Supreeth Segu [ ssegu ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            ssegu Sai Supreeth Segu (Inactive) made changes -
            Assignee Sai Supreeth Segu [ ssegu ]
            ann.loraine Ann Loraine made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5 [ 100, 101, 102, 103, 104, 113 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19 [ 100, 101, 102, 103, 104, 113, 114 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19 [ 100, 101, 102, 103, 104, 113, 114 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5 [ 100, 101, 102, 103, 104, 113, 114, 115 ]
            ann.loraine Ann Loraine made changes -
            Rank Ranked higher
            ann.loraine Ann Loraine made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            ann.loraine Ann Loraine made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            ann.loraine Ann Loraine made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            ann.loraine Ann Loraine made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            ann.loraine Ann Loraine made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            nfreese Nowlan Freese made changes -
            Resolution Done [ 10000 ]
            Status Closed [ 6 ] To-Do [ 10305 ]
            nfreese Nowlan Freese made changes -
            Assignee Jay Ostwal [ jayostwal ]
            nfreese Nowlan Freese made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5 [ 100, 101, 102, 103, 104, 113, 114, 115 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30 [ 100, 101, 102, 103, 104, 113, 114, 115, 119 ]
            jayostwal Jay Ostwal (Inactive) made changes -
            Attachment igb.png [ 15950 ]
            jayostwal Jay Ostwal (Inactive) made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            jayostwal Jay Ostwal (Inactive) made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            jayostwal Jay Ostwal (Inactive) made changes -
            Assignee Jay Ostwal [ jayostwal ]
            inaylor Irvin Naylor (Inactive) made changes -
            Assignee Irvin Naylor [ inaylor ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status First Level Review in Progress [ 10301 ] Needs 1st Level Review [ 10005 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            inaylor Irvin Naylor (Inactive) made changes -
            Assignee Irvin Naylor [ inaylor ] Jay Ostwal [ jayostwal ]
            nfreese Nowlan Freese made changes -
            Resolution Done [ 10000 ]
            Status Closed [ 6 ] To-Do [ 10305 ]
            nfreese Nowlan Freese made changes -
            Assignee Jay Ostwal [ jayostwal ]
            nfreese Nowlan Freese made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30 [ 100, 101, 102, 103, 104, 113, 114, 115, 119 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170 ]
            ann.loraine Ann Loraine made changes -
            Assignee Kaushik Gopu [ kgopu ]
            nfreese Nowlan Freese made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.transvar.org/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.transvar.org/display/ITD/IGB+Release+Documentation
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.transvar.org/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            # Click the “install IGB” button in the top right. (The appropriate version for your operating system should be supplied for you.)
            # Click the button to download IGB for your computer
            # Run the downloaded file
            # Follow the instructions in the setup wizard.
            # Open and run the Integrated Genome Browser software.
            # The IGB Quickstart webpage will open automatically in your web browser.
            # IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.bioviz.org/confluence/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.bioviz.org/confluence/display/ITD/IGB+Release+Documentation
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.bioviz.org/confluence/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            # Click the “install IGB” button in the top right. (The appropriate version for your operating system should be supplied for you.)
            # Click the button to download IGB for your computer
            # Run the downloaded file
            # Follow the instructions in the setup wizard.
            # Open and run the Integrated Genome Browser software.
            # The IGB Quickstart webpage will open automatically in your web browser.
            # IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            nfreese Nowlan Freese made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            kgopu Kaushik Gopu made changes -
            Attachment igb_1.0.png [ 17884 ]
            kgopu Kaushik Gopu made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            nfreese Nowlan Freese made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            nfreese Nowlan Freese made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            nfreese Nowlan Freese made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            nfreese Nowlan Freese made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            nfreese Nowlan Freese made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            nfreese Nowlan Freese made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            nfreese Nowlan Freese made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            nfreese Nowlan Freese made changes -
            Assignee Kaushik Gopu [ kgopu ]
            ann.loraine Ann Loraine made changes -
            Resolution Done [ 10000 ]
            Status Closed [ 6 ] To-Do [ 10305 ]
            ann.loraine Ann Loraine made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15, Fall 3 2023 Oct 2 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170, 179 ]
            ann.loraine Ann Loraine made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            nfreese Nowlan Freese made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Attachment igb.png [ 18052 ]
            nfreese Nowlan Freese made changes -
            Description Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.bioviz.org/confluence/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.bioviz.org/confluence/display/ITD/IGB+Release+Documentation
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.bioviz.org/confluence/display/igbdevelopers/Home

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            # Click the “install IGB” button in the top right. (The appropriate version for your operating system should be supplied for you.)
            # Click the button to download IGB for your computer
            # Run the downloaded file
            # Follow the instructions in the setup wizard.
            # Open and run the Integrated Genome Browser software.
            # The IGB Quickstart webpage will open automatically in your web browser.
            # IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            Welcome to your first on-boarding task for the IGB core development team!

            We are super excited you have joined us! We hope you will enjoy your time with us and will make big contributions to the code base and the IGB community.

            For the next steps, please do the following tasks to get familiar with IGB and how it is used.

            Note that this issue has 3 story points.

            A "story point" is an estimate for how long a task ought to take. One day is roughly equal to one story point.

            This means you should expect to spend about three working days on this "on-boarding" task. Take your time on this task and explore the IGB interface to better understand how it works.

            Reading:

            IGB on-line canvas course:
            * Enroll in https://canvas.instructure.com/courses/1164217
            * In Module I of the course, read: *IGB Background* and *Intro to IGB Data Visualization*

            IGB documentation:
            * Visit the IGB user's guide and get familiar with all the contents: https://wiki.bioviz.org/confluence/display/igbman/Home
            * Visit the IGB Release Documentation guide, which we use for testing new released. Get familiar with the contents: https://wiki.bioviz.org/confluence/display/ITD/How+to+test+-+read+this+first
            * Visit the IGB Developers guide and get familiar with the contents: https://wiki.bioviz.org/confluence/display/igbdevelopers/Developing+Integrated+Genome+Browser

            Get started using IGB:

            # Download and install the current release of IGB onto your computer from https://bioviz.org/
            # Click the “install IGB” button in the top right. (The appropriate version for your operating system should be supplied for you.)
            # Click the button to download IGB for your computer
            # Run the downloaded file
            # Follow the instructions in the setup wizard.
            # Open and run the Integrated Genome Browser software.
            # The IGB Quickstart webpage will open automatically in your web browser.
            # IGB may take several seconds to launch.
            # Using IGB, follow along and copy the actions shown in this video: https://www.youtube.com/watch?v=LjPNT1k9cqk
            # Re-create the scene shown at the very end of the video.
            # Then use the camera icon button in the IGB toolbar at the top, or go to *File > Save Image* to take a picture of IGB showing the scene at the end of the video;
            # Upload that image here as an attachment (you can use the plus icon to the right of *Attachments*).
            # Move the ticket to *Needs 1st Level Review* by clicking the *Workflow* dropdown button at the top (under the ticket name), and select *Request Review*. You could also drag the ticket over to the right one space from the *Agile board > IGB > Work view*.
            # Since this might be the first ticket you do, and it needs to be completed before you move on to On-Boarding: Step 1 (Step 0 is a blocker for Step 1): Reach out to another developer here to review your ticket with you before you move on.

            Reviewers:

            * Watch https://www.youtube.com/watch?v=LjPNT1k9cqk
            * Confirm that the assignee has uploaded an image with graphs loaded and configured to the same scale as each other, as shown in the video
            * Confirm that the assignee has enrolled in the class. To do this select the *People* tab and look for the student’s name in the list.
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
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            Assignee Jaya Sravani Sirigineedi [ jsirigin ] Ann Loraine [ aloraine ]
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            Assignee Molly Davis [ molly ] Jaya Sravani Sirigineedi [ jsirigin ]
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            Resolution Done [ 10000 ]
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            nfreese Nowlan Freese made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15, Fall 3 2023 Oct 2 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170, 179 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15, Fall 3 2023 Oct 2, Fall 4 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170, 179, 205 ]
            Assignee Jaya Sravani Sirigineedi [ jsirigin ] Udaya Chinta [ uchinta ]
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            uchinta Udaya Chinta made changes -
            Assignee Udaya Chinta [ uchinta ] Ann Loraine [ aloraine ]
            uchinta Udaya Chinta made changes -
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            ann.loraine Ann Loraine made changes -
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            Assignee Udaya Chinta [ uchinta ]
            uchinta Udaya Chinta made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            ann.loraine Ann Loraine made changes -
            Sprint Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15, Fall 3 2023 Oct 2, Fall 4 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170, 179, 205 ] Summer 5: 3 Aug - 14 Aug, Summer 6: 17 Aug - 28 Aug, Summer 7: 31 Aug - 11 Sep, Fall 1: 14 Sep - 25 Sep, Fall 2: 28 Sep - 9 Oct, Winter 3 Jan 25 - Feb 5, Winter 4 Feb 8 - Feb 19, Winter 5 Feb 22 - Mar 5, Spring 3 2021 Apr 19 - Apr 30, Summer 1 2023 May 15, Fall 3 2023 Oct 2, Fall 4, Fall 5 [ 100, 101, 102, 103, 104, 113, 114, 115, 119, 170, 179, 205, 206 ]
            ann.loraine Ann Loraine made changes -
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            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ] Udaya Chinta [ uchinta ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Udaya Chinta [ uchinta ] Jaya Sravani Sirigineedi [ jsirigin ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
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            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
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            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
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            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ] Udaya Chinta [ uchinta ]

              People

              • Assignee:
                uchinta Udaya Chinta
                Reporter:
                ann.loraine Ann Loraine
              • Votes:
                0 Vote for this issue
                Watchers:
                9 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: