Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-2579

Implement Upload by URL

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          3
        • Epic Link:
        • Sprint:
          Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11

          Description

          Situation: The Upload by URL option under the +New button in BioViz Connect does not appear to be wired up.

          Task: Implement the Upload by URL functionality so that a user can enter a URL and the file will be uploaded to their current BioViz Connect page.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-2076 Implement File Upload

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                nfreese Nowlan Freese created issue -
                nfreese Nowlan Freese made changes -
                Field Original Value New Value
                Epic Link IGBF-2376 [ 18533 ]
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-2076 [ IGBF-2076 ]
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 4 Oct 26 - Nov 6 [ 107 ] Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20 [ 107, 108 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                karthik Karthik Raveendran made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                Merged https://bitbucket.org/nfreese/django-cyversedev/pull-requests/209/igbf-2579-implement-upload-by-url-function/diff

                Show
                nfreese Nowlan Freese added a comment - Merged https://bitbucket.org/nfreese/django-cyversedev/pull-requests/209/igbf-2579-implement-upload-by-url-function/diff
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                nfreese Nowlan Freese made changes -
                Assignee Karthik Raveendran [ karthik ] Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                nfreese Nowlan Freese made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                nfreese Nowlan Freese made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                When I try to Upload by URL in BioViz Connect I see: "URL Error: Please check the URL"

                I tried the following two URLs:
                http://igbquickload.org/quickload/A_thaliana_Jun_2009/TAIR10.bed.gz
                ftp://ftp-trace.ncbi.nlm.nih.gov/giab/ftp/data/AshkenazimTrio/HG004_NA24143_mother/10XGenomics/README_10Xgenomes.txt

                Show
                nfreese Nowlan Freese added a comment - When I try to Upload by URL in BioViz Connect I see: "URL Error: Please check the URL" I tried the following two URLs: http://igbquickload.org/quickload/A_thaliana_Jun_2009/TAIR10.bed.gz ftp://ftp-trace.ncbi.nlm.nih.gov/giab/ftp/data/AshkenazimTrio/HG004_NA24143_mother/10XGenomics/README_10Xgenomes.txt
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Karthik Raveendran [ karthik ]
                nfreese Nowlan Freese made changes -
                Status Post-merge Testing In Progress [ 10003 ] To-Do [ 10305 ]
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                karthik Karthik Raveendran made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                Merged: https://bitbucket.org/nfreese/django-cyversedev/pull-requests/212/igbf-2579-fix-filename-uri-issue

                Show
                nfreese Nowlan Freese added a comment - Merged: https://bitbucket.org/nfreese/django-cyversedev/pull-requests/212/igbf-2579-fix-filename-uri-issue
                nfreese Nowlan Freese made changes -
                Assignee Karthik Raveendran [ karthik ] Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                Both uploads are now working.

                I would like to change a few things for usability:
                1) Add text to inform user that they should receive an email once the upload is complete (or has failed), and that they can then refresh the page to see the upload.
                2) Extend the time before the middle panel refreshes after the upload is scheduled by a couple of seconds.
                3) Remove toast from middle panel as it disappears as soon as the middle panel is refreshed.

                Show
                nfreese Nowlan Freese added a comment - Both uploads are now working. I would like to change a few things for usability: 1) Add text to inform user that they should receive an email once the upload is complete (or has failed), and that they can then refresh the page to see the upload. 2) Extend the time before the middle panel refreshes after the upload is scheduled by a couple of seconds. 3) Remove toast from middle panel as it disappears as soon as the middle panel is refreshed.
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Karthik Raveendran [ karthik ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                nfreese Nowlan Freese made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                nfreese Nowlan Freese made changes -
                Status Reviewing Pull Request [ 10303 ] To-Do [ 10305 ]
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Sprint Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20 [ 107, 108 ] Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 23 - Dec 4 [ 107, 108, 109 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                karthik Karthik Raveendran made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                Merged https://bitbucket.org/nfreese/django-cyversedev/pull-requests/215/igbf-2579

                Show
                nfreese Nowlan Freese added a comment - Merged https://bitbucket.org/nfreese/django-cyversedev/pull-requests/215/igbf-2579
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                Hide
                Permalink
                nfreese Nowlan Freese added a comment -

                Working well.

                Closing issue.

                Show
                nfreese Nowlan Freese added a comment - Working well. Closing issue.
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Karthik Raveendran [ karthik ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                nfreese Nowlan Freese made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                nfreese Nowlan Freese made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                nfreese Nowlan Freese made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                nfreese Nowlan Freese made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                nfreese Nowlan Freese made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                  People

                  • Assignee:
                    karthik Karthik Raveendran
                    Reporter:
                    nfreese Nowlan Freese
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    1 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: