[IGBF-2581] Fix: Bundle description not getting added to repository.xml for soft clips operator - JIRA UNCC

Details

Type: Bug
Status: Closed (View Workflow)
Priority: Major
Resolution: Done
Affects Version/s: None
Fix Version/s: None
Labels:
- Beginner

Story Points:
0.5
Epic Link:
Improve IGB for users
Sprint:
Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23, Winter 1 Dec 28 - Jan 8

Description

We now have a new IGB App that creates graphs from BAM files using only the soft clips.

The repository is here:
https://bitbucket.org/lorainelab/softclip_track_operation/src/master/

The POM.xml is configured to ensure that when you build the project, the file AppDescription.md gets base64-encoded and included in the repository.xml file.

This is required so that the information contained in the file gets shown to the user when they click on the app in the App Manager window within IGB.

However, this encoding is not happening for some reason.

Investigate why not.

For an example of this correctly working, see the other Apps in the IGB Apps Project.

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SoftClip_Operation.png
486 kB
10/Dec/20 12:12 PM

Activity

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Ann Loraine created issue - 31/Oct/20 1:43 PM

Ann Loraine made changes - 31/Oct/20 1:43 PM

Field	Original Value	New Value
Epic Link		IGBF-1765 [ 17855 ]

Ann Loraine made changes - 31/Oct/20 1:43 PM

Labels

Beginner

Ann Loraine made changes - 31/Oct/20 1:43 PM

Assignee

Ann Loraine [ aloraine ]

Ann Loraine made changes - 03/Nov/20 9:40 AM

Rank

Ranked higher

Sai Supreeth Segu (Inactive) made changes - 03/Nov/20 1:08 PM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

Sai Supreeth Segu (Inactive) made changes - 03/Nov/20 1:08 PM

Assignee

Sai Supreeth Segu [ ssegu ]

Sai Supreeth Segu (Inactive) made changes - 03/Nov/20 1:49 PM

Status

In Progress [ 3 ]

To-Do [ 10305 ]

Sai Supreeth Segu (Inactive) made changes - 03/Nov/20 1:49 PM

Assignee

Sai Supreeth Segu [ ssegu ]

Noor Zahara [ noor91zahara ]

Nowlan Freese made changes - 05/Nov/20 10:19 AM

Description

We now have a new IGB App that creates graphs from BAM files using only the soft clips.

The repository is here:
https://bitbucket.org/lorainelab/softclip_track_operation/src/master/

The POM.xml is configured to ensure that when you build the project, the file AppDescription.md gets base64-encoded and included in the repository.xml file.

This is required so that the information contained in the file gets shown to the user when the click on the app in the App Manager window within IGB.

However, this encoding is not happening for some reason.

Investigate why not.

For an example of this correctly working, see the other Apps in the IGB Apps Project.

We now have a new IGB App that creates graphs from BAM files using only the soft clips.

The repository is here:
https://bitbucket.org/lorainelab/softclip_track_operation/src/master/

The POM.xml is configured to ensure that when you build the project, the file AppDescription.md gets base64-encoded and included in the repository.xml file.

This is required so that the information contained in the file gets shown to the user when they click on the app in the App Manager window within IGB.

However, this encoding is not happening for some reason.

Investigate why not.

For an example of this correctly working, see the other Apps in the IGB Apps Project.

Irvin Naylor (Inactive) made changes - 05/Nov/20 10:32 AM

Assignee

Noor Zahara [ noor91zahara ]

Irvin Naylor [ inaylor ]

Irvin Naylor (Inactive) made changes - 05/Nov/20 4:31 PM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

Irvin Naylor (Inactive) made changes - 06/Nov/20 12:04 PM

Status

In Progress [ 3 ]

To-Do [ 10305 ]

Ann Loraine made changes - 10/Nov/20 6:48 AM

Sprint

Fall 4 Oct 26 - Nov 6 [ 107 ]

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20 [ 107, 108 ]

Ann Loraine made changes - 10/Nov/20 6:48 AM

Rank

Ranked higher

Irvin Naylor (Inactive) made changes - 12/Nov/20 11:11 AM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

Irvin Naylor (Inactive) made changes - 13/Nov/20 2:35 PM

Status

In Progress [ 3 ]

Needs 1st Level Review [ 10005 ]

Ann Loraine made changes - 13/Nov/20 3:05 PM

Status

Needs 1st Level Review [ 10005 ]

First Level Review in Progress [ 10301 ]

Ann Loraine made changes - 13/Nov/20 3:05 PM

Assignee

Irvin Naylor [ inaylor ]

Ann Loraine [ aloraine ]

Ann Loraine made changes - 13/Nov/20 3:06 PM

Status

First Level Review in Progress [ 10301 ]

Ready for Pull Request [ 10304 ]

Ann Loraine made changes - 13/Nov/20 3:06 PM

Assignee

Ann Loraine [ aloraine ]

Irvin Naylor [ inaylor ]

Irvin Naylor (Inactive) made changes - 13/Nov/20 3:18 PM

Status

Ready for Pull Request [ 10304 ]

Pull Request Submitted [ 10101 ]

Irvin Naylor (Inactive) made changes - 13/Nov/20 3:22 PM

Assignee

Irvin Naylor [ inaylor ]

Ann Loraine made changes - 17/Nov/20 11:00 AM

Status

Pull Request Submitted [ 10101 ]

Reviewing Pull Request [ 10303 ]

Ann Loraine made changes - 17/Nov/20 11:00 AM

Status

Reviewing Pull Request [ 10303 ]

Merged Needs Testing [ 10002 ]

Noor Zahara (Inactive) made changes - 17/Nov/20 12:18 PM

Status

Merged Needs Testing [ 10002 ]

Post-merge Testing In Progress [ 10003 ]

Noor Zahara (Inactive) made changes - 17/Nov/20 12:18 PM

Assignee

Noor Zahara [ noor91zahara ]

Noor Zahara (Inactive) made changes - 17/Nov/20 12:35 PM

Status

Post-merge Testing In Progress [ 10003 ]

To-Do [ 10305 ]

Noor Zahara (Inactive) made changes - 17/Nov/20 12:35 PM

Assignee

Noor Zahara [ noor91zahara ]

Irvin Naylor [ inaylor ]

Irvin Naylor (Inactive) made changes - 25/Nov/20 11:46 AM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

Irvin Naylor (Inactive) made changes - 25/Nov/20 11:46 AM

Status

In Progress [ 3 ]

To-Do [ 10305 ]

Ann Loraine made changes - 30/Nov/20 10:47 AM

Sprint

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20 [ 107, 108 ]

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 23 - Dec 4 [ 107, 108, 109 ]

Ann Loraine made changes - 30/Nov/20 10:47 AM

Rank

Ranked higher

Irvin Naylor (Inactive) made changes - 03/Dec/20 10:18 AM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

Irvin Naylor (Inactive) made changes - 04/Dec/20 2:11 PM

Status

In Progress [ 3 ]

Needs 1st Level Review [ 10005 ]

Irvin Naylor (Inactive) made changes - 04/Dec/20 2:12 PM

Assignee

Irvin Naylor [ inaylor ]

Sai Supreeth Segu (Inactive) made changes - 10/Dec/20 11:43 AM

Status

Needs 1st Level Review [ 10005 ]

First Level Review in Progress [ 10301 ]

Sai Supreeth Segu (Inactive) made changes - 10/Dec/20 11:43 AM

Assignee

Sai Supreeth Segu [ ssegu ]

Sai Supreeth Segu (Inactive) made changes - 10/Dec/20 12:12 PM

Attachment

SoftClip_Operation.png [ 14998 ]

Sai Supreeth Segu (Inactive) made changes - 10/Dec/20 12:13 PM

Status

First Level Review in Progress [ 10301 ]

Needs 1st Level Review [ 10005 ]

Sai Supreeth Segu (Inactive) made changes - 10/Dec/20 12:13 PM

Assignee

Sai Supreeth Segu [ ssegu ]

Ann Loraine made changes - 14/Dec/20 4:12 AM

Sprint

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11 [ 107, 108, 109 ]

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23 [ 107, 108, 109, 110 ]

Ann Loraine made changes - 14/Dec/20 4:13 AM

Rank

Ranked higher

Ann Loraine made changes - 18/Dec/20 9:37 AM

Status

Needs 1st Level Review [ 10005 ]

First Level Review in Progress [ 10301 ]

Ann Loraine made changes - 18/Dec/20 9:37 AM

Status

First Level Review in Progress [ 10301 ]

Ready for Pull Request [ 10304 ]

Ann Loraine made changes - 18/Dec/20 9:37 AM

Assignee

Irvin Naylor [ inaylor ]

Irvin Naylor (Inactive) made changes - 18/Dec/20 9:55 AM

Status

Ready for Pull Request [ 10304 ]

Pull Request Submitted [ 10101 ]

Irvin Naylor (Inactive) made changes - 18/Dec/20 10:01 AM

Assignee

Irvin Naylor [ inaylor ]

Ann Loraine made changes - 18/Dec/20 3:23 PM

Status

Pull Request Submitted [ 10101 ]

Reviewing Pull Request [ 10303 ]

Ann Loraine made changes - 18/Dec/20 3:23 PM

Status

Reviewing Pull Request [ 10303 ]

Merged Needs Testing [ 10002 ]

Ann Loraine made changes - 27/Dec/20 12:34 PM

Sprint

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23 [ 107, 108, 109, 110 ]

Fall 4 Oct 26 - Nov 6, Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23, Winter 1 Dec 28 - Jan 8 [ 107, 108, 109, 110, 111 ]

Ann Loraine made changes - 27/Dec/20 12:35 PM

Rank

Ranked higher

Ann Loraine made changes - 27/Dec/20 2:25 PM

Link

This issue relates to IGBF-2712 [ IGBF-2712 ]

Chester Dias (Inactive) made changes - 08/Jan/21 4:31 PM

Assignee

Chester Dias [ cdias1 ]

Chester Dias (Inactive) made changes - 08/Jan/21 4:40 PM

Status

Merged Needs Testing [ 10002 ]

Post-merge Testing In Progress [ 10003 ]

Chester Dias (Inactive) made changes - 08/Jan/21 4:40 PM

Assignee

Chester Dias [ cdias1 ]

Irvin Naylor [ inaylor ]

Chester Dias (Inactive) made changes - 08/Jan/21 4:40 PM

Resolution		Done [ 10000 ]
Status	Post-merge Testing In Progress [ 10003 ]	Closed [ 6 ]

Irvin Naylor (Inactive) made changes - 09/Feb/21 4:49 PM

Assignee

Irvin Naylor [ inaylor ]

People

Assignee:

Unassigned

Reporter:

Ann Loraine

Votes:

0 Vote for this issue

Watchers:

5 Start watching this issue

Dates

Created:

31/Oct/20 1:43 PM

Updated:

09/Feb/21 4:49 PM

Resolved:

08/Jan/21 4:40 PM