Tested Annotation Tracks, Everything is working fine but I wasn't able to test this part. I am not sure how to test it. [~aloraine], Please let me know how can I do it.
Verify that the count above each junction is equal to the number of reads that matched that gap.
Mac
Linux
Windows
Find someplace where the matching Find Junctions operation using value 5 and value 10 have different scores. Identify the read(s) that matches that junction, and where where one side of the read is between 5 and 10 bases.
Mac
Linux
Windows
Dr. Freese and I worked through the final two testing tasks mentioned above. Everything appears to be working normally. Moving to done.