Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None
    • Story Points:
      0.25
    • Sprint:
      Fall 5 Nov 9 - Nov 20, Fall 6 Nov 30 - Dec 11, Fall 7 Dec 14 - Dec 23

      Description

      Attempting to submit an app using a URL creates an error.
      Tried https://bitbucket.org/lorainelab/super-simple-igb-app/downloads/super-simple-igb-app-0.0.1.jar with devappstore5.bioviz.org.

      To test, enter a jar file from the Downloads section of one of the IGB Apps available from https://bitbucket.org/lorainelab/workspace/projects/IAQ.

        Attachments

          Activity

          Hide
          sameer Sameer Shanbhag (Inactive) added a comment -

          Reason:

          • PermissionError: [Errno 13] Permission denied: '/home/ubuntu/appstore/submit_appmerge-annotation-operator-9.1.0.jar'

          Currently fixing the issue.

          Show
          sameer Sameer Shanbhag (Inactive) added a comment - Reason: PermissionError: [Errno 13] Permission denied: '/home/ubuntu/appstore/submit_appmerge-annotation-operator-9.1.0.jar' Currently fixing the issue.
          Hide
          sameer Sameer Shanbhag (Inactive) added a comment -

          Hi Professor Ann Loraine,

          Currently the above error can be caused because there was inconsistency on how we were opening the temp file for writing and before closing the file we open it for writing which causes the permission issue, on windows it gives a specific error saying file is being used by another process, I have updated it so that this wont happen

          Show
          sameer Sameer Shanbhag (Inactive) added a comment - Hi Professor Ann Loraine , Currently the above error can be caused because there was inconsistency on how we were opening the temp file for writing and before closing the file we open it for writing which causes the permission issue, on windows it gives a specific error saying file is being used by another process, I have updated it so that this wont happen https://bitbucket.org/lorainelab/appstore/pull-requests/229/igbf-2659-fix-the-permission-issue-due-to
          Hide
          aloraine Ann Loraine added a comment -

          I have merged in the PR and deployed the new code to https://devappstore5.bioviz.org
          I am still seeing an "Internal Server Error" upon attempting to submit jar via a URL.
          attn: Sameer Shanbhag

          Show
          aloraine Ann Loraine added a comment - I have merged in the PR and deployed the new code to https://devappstore5.bioviz.org I am still seeing an "Internal Server Error" upon attempting to submit jar via a URL. attn: Sameer Shanbhag
          Hide
          sameer Sameer Shanbhag (Inactive) added a comment -

          Hi Professor Ann Loraine,

          This confirms that the windows and linux have two different problem, In windows the problem is caused due to the above reason where as in ubuntu the problem is caused due to lack of permissions for the user trying to create a temp file

          • we might need to change this in the Playbooks (give write permission to apache process on submit_app directory)

          Error:

          • PermissionError: [Errno 13] Permission denied: '/home/ubuntu/appstore/submit_app/merge-annotation-operator-9.1.0.jar'
          Show
          sameer Sameer Shanbhag (Inactive) added a comment - Hi Professor Ann Loraine , This confirms that the windows and linux have two different problem, In windows the problem is caused due to the above reason where as in ubuntu the problem is caused due to lack of permissions for the user trying to create a temp file we might need to change this in the Playbooks (give write permission to apache process on submit_app directory) Error: PermissionError: [Errno 13] Permission denied: '/home/ubuntu/appstore/submit_app/merge-annotation-operator-9.1.0.jar'
          Hide
          aloraine Ann Loraine added a comment -

          Thanks for the clarification!
          I am working on figuring out what needs to be done to fix the playbooks.

          Show
          aloraine Ann Loraine added a comment - Thanks for the clarification! I am working on figuring out what needs to be done to fix the playbooks.
          Hide
          ssegu Sai Supreeth Segu added a comment -

          Everything works fine. Moving to closed

          Show
          ssegu Sai Supreeth Segu added a comment - Everything works fine. Moving to closed

            People

            • Assignee:
              sameer Sameer Shanbhag (Inactive)
              Reporter:
              aloraine Ann Loraine
            • Votes:
              0 Vote for this issue
              Watchers:
              3 Start watching this issue

              Dates

              • Created:
                Updated:
                Resolved: