scRNA-tools

Delete the renv folder and create a new virtual environment using the command: virtualenv renv
Activate the virtual environment by going renv/Scripts and running the activate command
The application development server can be run in Flask by running test_server.py in 'docs' folder (Requires installation of a few packages)
URL: http://127.0.0.1:8765/index.html

Database schema: the database is a set of '.tsv' files in the database folder

categories-idx.tsv -> Tool and Category
categores.tsv -> Categories, Phase, Description (of the category)
doi-idx.tsv -> Tool and their DOI links
ignored.tsv -> Tool, Type, Name (purpose unclear)
references.tsv -> DOI, arXiv(T/F), Preprint(T/F), Date(of publication), Title(of the publication)
tools.tsv -> Tool, Platform(in which the tool is designed in), Code(repository link), Description, License, Added(date), Updated(date)

These files are read and loaded in the app using app/load.R. 'scrnatools' (home directory) is a command-line application for interacting with the database. The CRUD operations and other database functions that are in the 'app' folder are mapped in 'scrnatools'.

The virtual environment is python - correct? If yes, which version? (3 or 2?)

In my system, the python version is 3.7.0 the virtual environment version is 16.5.0

To set up scRNA-tools https://github.com/scRNA-tools/scRNA-tools/wiki/Setting-up

Discussed during scrum on July 1. We have extracted sufficient value from examining the code. Moving to Done.