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  1. IGB
  2. IGBF-2909

Determine if and how we can use Nextflow on UNCC HPC cluster

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          3
        • Epic Link:
        • Sprint:
          Fall 1 2021 Aug 16 - Aug 27, Fall 2 2021 Aug 30 - Sep10, Fall 3 2021 Sep 13 - Sep 24

          Description

          Determine if we can use Nextflow workflow management software on the UNC Charlotte compute cluster.

          For this task, we need to:

          • Get familiar with the UNC Charlotte compute cluster environment and job schedular
          • Understand how various software packages are configured and installed - how can we get Nextflow onto the cluster
          • Communicate with support personnnel to ask for new software to be installed, as required

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              relates to

              Task - A task that needs to be done. IGBF-2945 Run trimmomatic on HPC system using nextflow and Singularity

              • Major - Major loss of function.
              • Closed

                Activity

                  People

                  • Assignee:
                    ann.loraine Ann Loraine
                    Reporter:
                    ann.loraine Ann Loraine
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                    • Created:
                      Updated:
                      Resolved: