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  1. IGB
  2. IGBF-3052

Please fix: problems with loading table and clicking genome version icons

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Note: I'm not sure if this is a problem with just my browser and not clearing the cache or memory properly.

      When trying to view the table at https://bioviz.org/public-trackhubs.html, an error message appeared in the console and the table never loaded.

      A screen capture showing the problem and the error message is attached.

      Also, clicking the icons in the final column did not do anything, even though IGB was running on the desktop. (I'm not sure if these problems are related or not.)

        Attachments

        1. screenshot-1.png
          73 kB
          Omkar Marne
        2. err.png
          370 kB
          Ann Loraine

          Activity

          Hide
          omarne Omkar Marne (Inactive) added a comment - - edited

          Testing results:

          After opening IGB and coping quickload URL as a datasource from the trackhub site, I am able to see the genome of the respective data source in the IGB.

          Closing the ticket.

          Show
          omarne Omkar Marne (Inactive) added a comment - - edited Testing results: After opening IGB and coping quickload URL as a datasource from the trackhub site, I am able to see the genome of the respective data source in the IGB. Closing the ticket.
          Hide
          ann.loraine Ann Loraine added a comment -

          Request for Omkar Marne:

          Now that the table is working, please test the table interface.

          Show
          ann.loraine Ann Loraine added a comment - Request for Omkar Marne : Now that the table is working, please test the table interface.
          Hide
          pbadzuh Philip Badzuh (Inactive) added a comment -

          https://www.bioviz.org/public-trackhubs.html seems to be working now...is the version of bioviz-playbooks that you just ran the same one that you ran previously, [~aloraine]? If so, I am unsure as to what could have caused this problem.

          Show
          pbadzuh Philip Badzuh (Inactive) added a comment - https://www.bioviz.org/public-trackhubs.html seems to be working now...is the version of bioviz-playbooks that you just ran the same one that you ran previously, [~aloraine] ? If so, I am unsure as to what could have caused this problem.
          Hide
          ann.loraine Ann Loraine added a comment -

          Logged into bioviz main host and checked the file util.js:

          www.bioviz.org ec2-user $ git diff trackhub/util.js
          diff --git a/htdocs/js/trackhub/util.js b/htdocs/js/trackhub/util.js
          index 31b7fb4..0b2a659 100644
          --- a/htdocs/js/trackhub/util.js
          +++ b/htdocs/js/trackhub/util.js
          @@ -1,4 +1,4 @@
          -export const BACKEND_DOMAIN = "http://localhost:8000";
          +export const BACKEND_DOMAIN = "translate.bioviz.org";
           
           export function convertURL(url) {
             return BACKEND_DOMAIN.includes("http")
          

          Does this solve the problem?

          cc: Philip Badzuh

          Show
          ann.loraine Ann Loraine added a comment - Logged into bioviz main host and checked the file util.js: www.bioviz.org ec2-user $ git diff trackhub/util.js diff --git a/htdocs/js/trackhub/util.js b/htdocs/js/trackhub/util.js index 31b7fb4..0b2a659 100644 --- a/htdocs/js/trackhub/util.js +++ b/htdocs/js/trackhub/util.js @@ -1,4 +1,4 @@ -export const BACKEND_DOMAIN = "http: //localhost:8000" ; +export const BACKEND_DOMAIN = "translate.bioviz.org" ; export function convertURL(url) { return BACKEND_DOMAIN.includes( "http" ) Does this solve the problem? cc: Philip Badzuh
          Hide
          ann.loraine Ann Loraine added a comment -


          Ready for review by Philip Badzuh.

          Show
          ann.loraine Ann Loraine added a comment - Ready for review by Philip Badzuh .

            People

            • Assignee:
              pbadzuh Philip Badzuh (Inactive)
              Reporter:
              ann.loraine Ann Loraine
            • Votes:
              0 Vote for this issue
              Watchers:
              3 Start watching this issue

              Dates

              • Created:
                Updated:
                Resolved: