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  1. IGB
  2. IGBF-3099

Analyze differential expression using RNA-Seq

        Details

        • Type: Task
        • Status: To-Do (View Workflow)
        • Priority: Major
        • Resolution: Unresolved
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Situation: Since we have run the RNA-Seq alignments using NextFlow, we now need to rerun the differential expression analysis using the new read counts file.

          Task: Run the differential expression analysis using the new read counts file.

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              relates to

              Task - A task that needs to be done. IGBF-3043 Align and process rice RNA-Seq data using nf-core/rnaseq pipeline

              • Major - Major loss of function.
              • Closed

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                  • Assignee:
                    Unassigned
                    Reporter:
                    nfreese Nowlan Freese
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                    Dates

                    • Created:
                      Updated: