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  1. IGB
  2. IGBF-3255

Submit MJ time course data to SRA

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          2
        • Epic Link:
        • Sprint:
          Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24, Spring 9 2023 May 1, Summer 1 2023 May 15, Summer 2 2023 May 29

          Description

          Under its own SRP accession, submit the Mark Johnson time course data to the Sequence Read Archive.

          For sample info, see Google Drive.

          Files related to this task will be in Google Drive here:

          https://drive.google.com/drive/folders/1wR-eyIiUvHTvw9LB67YkFnfaZU3qFgKO?usp=share_link

          Details:
          The Azenta Invoice / account ID = 30-771363348
          (in the event we even need to contact them related to this project)

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3254 Submit Johnson lab mature pollen and tomato seedling data to SRA

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                ann.loraine Ann Loraine created issue -
                ann.loraine Ann Loraine made changes -
                Field Original Value New Value
                Epic Link IGBF-2993 [ 21429 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 4 2023 Feb 21 [ 164 ] Spring 5 2023 Mar 6 [ 165 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 5 2023 Mar 6 [ 165 ] Spring 5 2023 Mar 6, Spring 6 2023 Mar 20 [ 165, 166 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Sprint Spring 5 2023 Mar 6, Spring 6 2023 Mar 20 [ 165, 166 ] Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10 [ 165, 166, 167 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Sprint Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10 [ 165, 166, 167 ] Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24 [ 165, 166, 167, 168 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Description Under its own SRP accession, submit the Mark Johnson time course data to the Sequence Read Archive.

                For sample info, see Google Drive.
                ann.loraine Ann Loraine made changes -
                Link This issue is blocked by IGBF-3254 [ IGBF-3254 ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3254 [ IGBF-3254 ]
                ann.loraine Ann Loraine made changes -
                Link This issue is blocked by IGBF-3254 [ IGBF-3254 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24 [ 165, 166, 167, 168 ] Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24, Spring 9 2023 May 8 [ 165, 166, 167, 168, 169 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                robofjoy Robert Reid made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                robofjoy Robert Reid made changes -
                Assignee Robert Reid [ robertreid ]
                robofjoy Robert Reid made changes -
                Description Under its own SRP accession, submit the Mark Johnson time course data to the Sequence Read Archive.

                For sample info, see Google Drive.
                		Under its own SRP accession, submit the Mark Johnson time course data to the Sequence Read Archive.

                For sample info, see Google Drive.

                Files related to this task will be in Google Drive here:

                [https://drive.google.com/drive/folders/1wR-eyIiUvHTvw9LB67YkFnfaZU3qFgKO?usp=share_link]

                robofjoy Robert Reid made changes -
                Description Under its own SRP accession, submit the Mark Johnson time course data to the Sequence Read Archive.

                For sample info, see Google Drive.

                Files related to this task will be in Google Drive here:

                [https://drive.google.com/drive/folders/1wR-eyIiUvHTvw9LB67YkFnfaZU3qFgKO?usp=share_link]

                		Under its own SRP accession, submit the Mark Johnson time course data to the Sequence Read Archive.

                For sample info, see Google Drive.

                Files related to this task will be in Google Drive here:

                [https://drive.google.com/drive/folders/1wR-eyIiUvHTvw9LB67YkFnfaZU3qFgKO?usp=share_link]

                Details:
                The Azenta Invoice / account ID = 30-771363348
                (in the event we even need to contact them related to this project)
                ann.loraine Ann Loraine made changes -
                Sprint Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24, Spring 9 2023 May 1 [ 165, 166, 167, 168, 169 ] Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24, Spring 9 2023 May 1, Summer 1 2023 May 15 [ 165, 166, 167, 168, 169, 170 ]
                robofjoy Robert Reid made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24, Spring 9 2023 May 1, Summer 1 2023 May 15 [ 165, 166, 167, 168, 169, 170 ] Spring 5 2023 Mar 6, Spring 6 2023 Mar 20, Spring 7 2023 Apr 10, Spring 8 2023 Apr 24, Spring 9 2023 May 1, Summer 1 2023 May 15, Summer 2 2023 May 29 [ 165, 166, 167, 168, 169, 170, 171 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                robofjoy Robert Reid made changes -
                Assignee Robert Reid [ robertreid ] Molly Davis [ molly ]
                Mdavis4290 Molly Davis made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                Mdavis4290 Molly Davis made changes -
                Assignee Molly Davis [ molly ] Nowlan Freese [ nfreese ]
                Mdavis4290 Molly Davis made changes -
                Status First Level Review in Progress [ 10301 ] Needs 1st Level Review [ 10005 ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] Needs 1st Level Review [ 10005 ]
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Assignee Nowlan Freese [ nfreese ] Robert Reid [ robertreid ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
                robofjoy Robert Reid made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                robofjoy Robert Reid made changes -
                Attachment SRA_BiosampleForm-Mark_TimeSeries - Plant.1.0-final.tsv [ 17892 ]
                robofjoy Robert Reid made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                robofjoy Robert Reid made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                robofjoy Robert Reid made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                robofjoy Robert Reid made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                robofjoy Robert Reid made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                robofjoy Robert Reid made changes -
                Status Reviewing Pull Request [ 10303 ] Pull Request Submitted [ 10101 ]
                robofjoy Robert Reid made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                robofjoy Robert Reid made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                robofjoy Robert Reid made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                robofjoy Robert Reid made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                  People

                  • Assignee:
                    robofjoy Robert Reid
                    Reporter:
                    ann.loraine Ann Loraine
                  • Votes:
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                    Dates

                    • Created:
                      Updated:
                      Resolved: