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  1. IGB
  2. IGBF-3409

Fix wheat genome files and documentation

        Details

        • Type: Task
        • Status: To-Do (View Workflow)
        • Priority: Major
        • Resolution: Unresolved
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          This directory:

          http://lorainelab-quickload.scidas.org/quickload/T_aestivum_Aug_2018/

          contains a ".csi" file instead of a ".tbi" file.

          Not clear why. Investigate and fix.

          Also, modify the "annots.xml" to point IGB to a sequence file stored at EBI or wherever it is.

          After doing this, update HEADER.md in the quickload svn repository to no longer advise users to retrieve and deploy the wheat genome file.

            Attachments

              Issue Links

              relates to

              New Feature - A new feature of the product, which has yet to be developed. IGBF-2538 Support CSI tabix index for very large genomes

              • Major - Major loss of function.
              • To-Do

              Task - A task that needs to be done. IGBF-2333 Add wheat genome to IGB quickload system

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    Unassigned
                    Reporter:
                    ann.loraine Ann Loraine
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                    Dates

                    • Created:
                      Updated: