Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Sprint:Fall 4 2023 Oct 16, Fall 5
Description
The goal is to add to the existing EB-SEQ table results (From IBGF-3454).
The table currently includes the EB-SEQ results along with the SolyID and gene description.
What we can add:
- The read expression counts data from Salmon.
- The deseq2 results, values, log fold changes, pvalues, etc.
- EdgeR data
This would produce an unwieldy table, 100's of columns long!
I am going to first touch base with Gloria about what would be the most useful.
Attachments
Issue Links
- is blocked by
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2993 [ 21429 ] |
| Description |
The goal is to add to the existing EB-SEQ table results (From IBGF-3454). The table currently includes the EB-SEQ results along with the SolyID and gene description. What we can add: * The read expression counts data from Salmon. * The deseq2 results, values, log fold changes, pvalues, etc. * EdgeR data This would produce an unwieldy table, 100's of columns long! I am going to first touch base with Gloria about what would be the most useful. |
The goal is to add to the existing EB-SEQ table results (From IBGF-3454).
The table currently includes the EB-SEQ results along with the SolyID and gene description. What we can add: * The read expression counts data from Salmon. * The deseq2 results, values, log fold changes, pvalues, etc. * EdgeR data This would produce an unwieldy table, 100's of columns long! I am going to first touch base with Gloria about what would be the most useful. |
| Sprint | Fall 4 2023 Oct 16 [ 180 ] |
| Sprint | Fall 4 2023 Oct 16 [ 180 ] | Fall 4 2023 Oct 16, Fall 5 [ 180, 181 ] |
| Rank | Ranked higher |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |