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  1. IGB
  2. IGBF-3503 Implement UCSC REST API logic in IGB
  3. IGBF-3505

Implement an API to get the UCSC available genomes

        Details

        • Type: Sub-task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: 10.1.0
        • Labels:
          None
        • Story Points:
          2
        • Sprint:
          Fall 7, Fall 8, Spring 1, Spring 2, Spring 3

          Description

          Develop code to connect to the https://api.genome.ucsc.edu/list/ucscGenomes API and get the available genomes.

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              jsirigin Jaya Sravani Sirigineedi created issue -
              jsirigin Jaya Sravani Sirigineedi made changes -
              Field Original Value New Value
              Status To-Do [ 10305 ] In Progress [ 3 ]
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              jsirigin Jaya Sravani Sirigineedi added a comment - - edited

              Added model classes according to the JSON response from the API and integrated the API as well to get the available genomes from the provided UCSC Rest API. Written a test case as well to check the functionality. Below is the branch where the code is available for the same: https://bitbucket.org/jaya-sravani/integrated-genome-browser/branch/IGBF-3501

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              jsirigin Jaya Sravani Sirigineedi added a comment - - edited Added model classes according to the JSON response from the API and integrated the API as well to get the available genomes from the provided UCSC Rest API. Written a test case as well to check the functionality. Below is the branch where the code is available for the same: https://bitbucket.org/jaya-sravani/integrated-genome-browser/branch/IGBF-3501
              jsirigin Jaya Sravani Sirigineedi made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Assignee Jaya Sravani Sirigineedi [ jsirigin ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Assignee Jaya Sravani Sirigineedi [ jsirigin ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              jsirigin Jaya Sravani Sirigineedi made changes -
              Assignee Jaya Sravani Sirigineedi [ jsirigin ]
              Hide
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              nfreese Nowlan Freese added a comment - - edited

              Reviewed code so far. We also discussed the general approach with David, and he felt this was the correct direction for this project.

              We are not going to push these changes to the lorainelab fork yet as the project is not in a testable state.

              Closing ticket.

              Show
              nfreese Nowlan Freese added a comment - - edited Reviewed code so far. We also discussed the general approach with David, and he felt this was the correct direction for this project. We are not going to push these changes to the lorainelab fork yet as the project is not in a testable state. Closing ticket.
              nfreese Nowlan Freese made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              nfreese Nowlan Freese made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              nfreese Nowlan Freese made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              nfreese Nowlan Freese made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              nfreese Nowlan Freese made changes -
              Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
              nfreese Nowlan Freese made changes -
              Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
              nfreese Nowlan Freese made changes -
              Resolution Done [ 10000 ]
              Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
              nfreese Nowlan Freese made changes -
              Assignee Jaya Sravani Sirigineedi [ jsirigin ]
              nfreese Nowlan Freese made changes -
              Fix Version/s 10.1.0 [ 11000 ]

                People

                • Assignee:
                  jsirigin Jaya Sravani Sirigineedi
                  Reporter:
                  jsirigin Jaya Sravani Sirigineedi
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                  Watchers:
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                  Dates

                  • Created:
                    Updated:
                    Resolved: