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  1. IGB
  2. IGBF-3513

Take notes on JDK 21 tasks

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          5
        • Epic Link:
        • Sprint:
          Fall 7, Fall 8, Spring 1, Spring 2, Spring 3, Spring 5

          Description

          1. Fix app manager install/uninstall
          2. Update JUnit to version 5
          3. Stop skipping tests in build
          4. Change IGB to version 10.0.0
          5. Fix IGB Apps as necessary for new IGB version
          6. Update Windows signing key -> In progress in IGBF-3541
          7. Fix BioViz Connect not loading data -> issue with CyVerse
          8. Update BioViz.org to detect M Mac chips -> provide both installers
          9. Why is installer so big? -> the JRE is big
          10. Test FlatLaf - night/day look -> Will use the "light" LAF for the release (were using "metal" LAF on Linux, "Aqua" on Mac? , and something else for Windows)
          11. Fix build process warnings and errors
          12. Update IGB developer documentation for how to run IGB through an IDE, including how to attach a debugger
          13. Further document how to create the various JREs through Install4Jv10

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              nfreese Nowlan Freese added a comment -

              Nowlan's notes: https://docs.google.com/document/d/1emYy3EgbHbMIrg-WBbx8yYzYAeXGq7FfIuM8uUX4aYU/edit?usp=sharing

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              nfreese Nowlan Freese added a comment - Nowlan's notes: https://docs.google.com/document/d/1emYy3EgbHbMIrg-WBbx8yYzYAeXGq7FfIuM8uUX4aYU/edit?usp=sharing
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              nfreese Nowlan Freese added a comment -

              Modified following pages on how to run and debug IGB following upgrade to Java 21:
              https://canvas.instructure.com/courses/1164217/pages/set-up-your-local-development-environment?module_item_id=12709533
              https://canvas.instructure.com/courses/1164217/pages/learn-netbeans-debugger?module_item_id=12709545
              https://wiki.bioviz.org/confluence/display/igbdevelopers/Developing+Integrated+Genome+Browser
              https://wiki.bioviz.org/confluence/display/igbdevelopers/Debug+IGB+with+Netbeans

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              nfreese Nowlan Freese added a comment - Modified following pages on how to run and debug IGB following upgrade to Java 21: https://canvas.instructure.com/courses/1164217/pages/set-up-your-local-development-environment?module_item_id=12709533 https://canvas.instructure.com/courses/1164217/pages/learn-netbeans-debugger?module_item_id=12709545 https://wiki.bioviz.org/confluence/display/igbdevelopers/Developing+Integrated+Genome+Browser https://wiki.bioviz.org/confluence/display/igbdevelopers/Debug+IGB+with+Netbeans
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              nfreese Nowlan Freese added a comment -

              I have created a pull request with updated instructions for how to create the JRE bundles using Install4J.

              Pull request: https://bitbucket.org/lorainelab/integrated-genome-browser-docker/pull-requests/10

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              nfreese Nowlan Freese added a comment - I have created a pull request with updated instructions for how to create the JRE bundles using Install4J. Pull request: https://bitbucket.org/lorainelab/integrated-genome-browser-docker/pull-requests/10
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              ann.loraine Ann Loraine added a comment - - edited

              PR is merged. Moving to "Needs testing" and next sprint. So that we can assess the instructions after the release.

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              ann.loraine Ann Loraine added a comment - - edited PR is merged. Moving to "Needs testing" and next sprint. So that we can assess the instructions after the release.

                People

                • Assignee:
                  nfreese Nowlan Freese
                  Reporter:
                  nfreese Nowlan Freese
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                  Dates

                  • Created:
                    Updated:
                    Resolved: