Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Spring 5, Spring 6, Spring 7, Spring 8, Spring 9
Description
mark-2022-timeseries experiment has been submitted to SRA and rerun with nextflow. A sanity check will need to be performed on the original data and the rerun SRA data to ensure the submission to NCBI was correct.
The next step is adding the SRA data to IGB Quickload. To do this a sample sheet is required.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2993 [ 21429 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Rank | Ranked higher |
| Assignee | Molly Davis [ molly ] | Ann Loraine [ aloraine ] |
| Sprint | Spring 5 [ 189 ] | Spring 5, Spring 6 [ 189, 190 ] |
| Rank | Ranked higher |
| Sprint | Spring 5, Spring 6 [ 189, 190 ] | Spring 5, Spring 6, Spring 7 [ 189, 190, 191 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Ann Loraine [ aloraine ] | Molly Davis [ molly ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Summary | Make sample sheet for SRP441343 | Make sample sheet for SRP441343 and add to makeAnnotsXml.py |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Molly Davis [ molly ] |
| Assignee | Ann Loraine [ aloraine ] |
| Sprint | Spring 5, Spring 6, Spring 7 [ 189, 190, 191 ] | Spring 5, Spring 6, Spring 7, Spring 8 [ 189, 190, 191, 192 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Ann Loraine [ aloraine ] | Molly Davis [ molly ] |
| Assignee | Molly Davis [ molly ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Assignee | Ann Loraine [ aloraine ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Assignee | Ann Loraine [ aloraine ] |
| Sprint | Spring 5, Spring 6, Spring 7, Spring 8 [ 189, 190, 191, 192 ] | Spring 5, Spring 6, Spring 7, Spring 8, Spring 9 [ 189, 190, 191, 192, 193 ] |
| Rank | Ranked higher |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Assignee | Molly Davis [ molly ] |