[IGBF-3904] Add UCSC REST API to release documentation - JIRA UNCC

Details

Type: Task
Status: Closed (View Workflow)
Priority: Critical
Resolution: Done
Affects Version/s: None
Fix Version/s: None
Labels:
None

Story Points:
1
Epic Link:
Improve IGB for developers
Sprint:
Fall 2

Description

Situation: We've recently added UCSC's REST API as a new data provider in IGB.

Task: Create a new subsystems page within the IGB Release Documentation for testing the UCSC REST API functionality in IGB ahead of the upcoming release.

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Paige Kulzer created issue - 13/Sep/24 11:54 AM

Paige Kulzer made changes - 13/Sep/24 11:54 AM

Field	Original Value	New Value
Epic Link		IGBF-1531 [ 17617 ]

Paige Kulzer made changes - 13/Sep/24 11:54 AM

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Paige Kulzer made changes - 16/Sep/24 10:26 AM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

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Paige Kulzer added a comment - 16/Sep/24 4:09 PM

I've created a new page in the IGB Release Documentation called REST API Data Sources and have added a protocol for testing the functionality of the UCSC REST API.

Link: https://wiki.bioviz.org/confluence/display/ITD/REST+API+Data+Sources

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Paige Kulzer added a comment - 16/Sep/24 4:09 PM I've created a new page in the IGB Release Documentation called REST API Data Sources and have added a protocol for testing the functionality of the UCSC REST API. Link: https://wiki.bioviz.org/confluence/display/ITD/REST+API+Data+Sources

Paige Kulzer made changes - 16/Sep/24 4:09 PM

Status

In Progress [ 3 ]

Needs 1st Level Review [ 10005 ]

Paige Kulzer made changes - 16/Sep/24 4:09 PM

Assignee

Paige Kulzer [ pkulzer ]

Nowlan Freese [ nfreese ]

Nowlan Freese made changes - 17/Sep/24 3:10 PM

Status

Needs 1st Level Review [ 10005 ]

First Level Review in Progress [ 10301 ]

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Nowlan Freese added a comment - 17/Sep/24 3:39 PM

This looks good to me. The previous issues we were seeing with UCSC REST were when we disabled then re-enabled the data provider, and when trying to load a genome and data of a genome only found in UCSC REST.

Closing ticket.

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Nowlan Freese added a comment - 17/Sep/24 3:39 PM This looks good to me. The previous issues we were seeing with UCSC REST were when we disabled then re-enabled the data provider, and when trying to load a genome and data of a genome only found in UCSC REST. Closing ticket.