Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Fall 6, Fall 7, Winter 1
Description
GOAL:
To run EB-Seq on Kelsie's data and get a preliminary result.
End result:
EB seq results
Share the script to run EB-Seq with Kelsie so that she can reproduce the findings.
Attachments
Activity
The results have been shared to the shared Google Drive as a folder here:
https://drive.google.com/drive/folders/1Y03d2NFfXUvVa3_1_pt-WdwdvEDcLG63?usp=drive_link
In there, is the R QMD markdown for the analysis.
This is being shared with Kelsey to test out and compare the results contained therein.
Upon hearing from her as the tester, this will remain under review at this stage.
The data for this is provided by Kelsie (via Cedar).
The salmon table is on the Google drive:
https://drive.google.com/drive/folders/1Vp6US0ItacF0g9m9QR1FqOwXFQB9tf_S?usp=drive_link
I will pull this down to my laptop and run EB-seq from there.
For my own notes:
/Users/rreid2/Dropbox (UNC Charlotte)/R/kelsie
I am going to close this as we won't hear from her in the next few weeks.
Will make new ticket when the next phase arises.