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  1. IGB
  2. IGBF-3995

Filtering N's from the NCS filtered sequences

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      With the success of the FCS filters, we once again uploaded the samples up to the TSA.
      The TSA rejected the submission due to the oroginal issue of having N's in the first 20 BP of the sample.

      Since Brandon has a script to do remove these already, we will rerun that script on the FCS filtered samples.

      And then resubmit

        Attachments

          Activity

          robofjoy Robert Reid created issue -
          robofjoy Robert Reid made changes -
          Field Original Value New Value
          Epic Link IGBF-2993 [ 21429 ]
          robofjoy Robert Reid made changes -
          Summary Filterning N's from the NCS filtered sequwnces Filtering N's from the NCS filtered sequences
          robofjoy Robert Reid made changes -
          Description
          With the success of the FCS filters, we once again uploaded the samples up to the TSA.
          The TSA rejected the submission due to the oroginal issue of having N's in the first 20 BP of the sample.

          Since Brandon has a script to do remove these already, we will rerun that script on the FCS filtered samples.

          And then resubmit
          With the success of the FCS filters, we once again uploaded the samples up to the TSA.
          The TSA rejected the submission due to the oroginal issue of having N's in the first 20 BP of the sample.

          Since Brandon has a script to do remove these already, we will rerun that script on the FCS filtered samples.

          And then resubmit
          bbendick Brandon Bendickson made changes -
          Assignee Brandon Bendickson [ bbendick ] Robert Reid [ robertreid ]
          bbendick Brandon Bendickson made changes -
          Status To-Do [ 10305 ] In Progress [ 3 ]
          bbendick Brandon Bendickson made changes -
          Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
          robofjoy Robert Reid made changes -
          Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
          robofjoy Robert Reid made changes -
          Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
          robofjoy Robert Reid made changes -
          Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
          robofjoy Robert Reid made changes -
          Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
          robofjoy Robert Reid made changes -
          Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
          robofjoy Robert Reid made changes -
          Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
          robofjoy Robert Reid made changes -
          Resolution Done [ 10000 ]
          Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

            People

            • Assignee:
              robofjoy Robert Reid
              Reporter:
              robofjoy Robert Reid
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              Dates

              • Created:
                Updated:
                Resolved: