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  1. IGB
  2. IGBF-4144

SRA submission of single cell RNA study

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          GOAL: To make Rasha's single cell data publicly available into the NCBI SRA.
          Same process as the previous.

          Need the raw sequences. Need the metadata

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              Task - A task that needs to be done. IGBF-4143 Retrieve the BAM files for Rasha's single cell study

              • Major - Major loss of function.
              • Closed

                Activity

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                robofjoy Robert Reid created issue -
                robofjoy Robert Reid made changes -
                Field Original Value New Value
                Epic Link IGBF-2993 [ 21429 ]
                robofjoy Robert Reid made changes -
                Link This issue is blocked by IGBF-4143 [ IGBF-4143 ]
                robofjoy Robert Reid made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
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                robofjoy Robert Reid added a comment -

                This work was finished previously. I thought it was a newer dataset.

                Release date: 2024-10-15

                Your SRA records will be accessible with the following link after the indicated release date:

                https://www.ncbi.nlm.nih.gov/sra/PRJNA1172608

                Show
                robofjoy Robert Reid added a comment - This work was finished previously. I thought it was a newer dataset. Release date: 2024-10-15 Your SRA records will be accessible with the following link after the indicated release date: https://www.ncbi.nlm.nih.gov/sra/PRJNA1172608
                robofjoy Robert Reid made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                robofjoy Robert Reid made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                robofjoy Robert Reid made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                robofjoy Robert Reid made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                robofjoy Robert Reid made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                robofjoy Robert Reid made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                robofjoy Robert Reid made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                robofjoy Robert Reid made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                  People

                  • Assignee:
                    robofjoy Robert Reid
                    Reporter:
                    robofjoy Robert Reid
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                    Dates

                    • Created:
                      Updated:
                      Resolved: