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  1. IGB
  2. IGBF-4210

Search for updated KEGG Ids for tomato

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
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          Description

          Goal: To search out there if there are any more recent files that map KEGG ids to Soly Ids.

          I did this back in 2021 and grabbed what was available at the time. Maybe there are better resources now.

          Search the world. See what we can find that is updated.

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              Task - A task that needs to be done. IGBF-4205 GAGE and Pathview on Kelsey Unpol data

              • Major - Major loss of function.
              • Closed

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                bbendick Brandon Bendickson added a comment -

                This is kind of the same as 4215. We are getting Kegg ids by mapping the SolyIDs to Refseq ids by BLAST

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                bbendick Brandon Bendickson added a comment - This is kind of the same as 4215. We are getting Kegg ids by mapping the SolyIDs to Refseq ids by BLAST

                  People

                  • Assignee:
                    bbendick Brandon Bendickson
                    Reporter:
                    robofjoy Robert Reid
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                    Dates

                    • Created:
                      Updated:
                      Resolved: