Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 10.2.0
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Labels:None
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Story Points:10
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Epic Link:
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Sprint:Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6, Fall 7, Fall 8, Fall 9
Description
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task:
- Users must be able to import 2-column or 3-column tsv/csv/txt file
- Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now.
- Anticipate potential user errors while importing and handle it.
- Importing 3-column files, includes cluster id, users should be able to choose between:
- using the feature as it is right now - color by samtools tag values such as cell barcode
- or, color by cluster ids
Attachments
Issue Links
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- Closed
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- Closed
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- Closed
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- Closed
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-3765 [ 22984 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Summary | Add the ability to include cluster information to Filter function | Add the ability to include cluster information to Color by function |
| Description |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: 1) Users must be able to import 2-column or 3-column tsv/csv/txt file 2) Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. 3) Importing 3-column files, includes cluster id, users should be able to choose between using the feature |
| Summary | Add the ability to include cluster information to Color by function | Add the ability to include cluster information to SAMtools tagsColor by feature |
| Summary | Add the ability to include cluster information to SAMtools tagsColor by feature | Add the ability to include cluster information to SAMtools tags Color by feature |
| Description |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: 1) Users must be able to import 2-column or 3-column tsv/csv/txt file 2) Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. 3) Importing 3-column files, includes cluster id, users should be able to choose between using the feature |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids # Anticipate potential user errors while importing and handle it. |
| Description |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids # Anticipate potential user errors while importing and handle it. |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids |
| Description |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids |
| Description |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids |
| Description |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: * using the feature as it is right now - color by samtools tag values such as cell barcode * or, color by cluster ids |
Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.
For the completion of this task: # Users must be able to import 2-column or 3-column tsv/csv/txt file # Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now. # Anticipate potential user errors while importing and handle it. # Importing 3-column files, includes cluster id, users should be able to choose between: - using the feature as it is right now - color by samtools tag values such as cell barcode - or, color by cluster ids |
| Sprint | Fall 1 [ 83 ] | Fall 1, Fall 2 [ 83, 225 ] |
| Rank | Ranked higher |
| Attachment | pbmc_cell_color_info.txt [ 18853 ] |
| Attachment | IGBF-4295-test-files.zip [ 18854 ] |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Sprint | Fall 1, Fall 2 [ 83, 225 ] | Fall 1, Fall 2, Fall 3 [ 83, 225, 226 ] |
| Rank | Ranked higher |
| Sprint | Fall 1, Fall 2, Fall 3 [ 83, 225, 226 ] | Fall 1, Fall 2, Fall 3, Fall 4 [ 83, 225, 226, 227 ] |
| Rank | Ranked higher |
| Sprint | Fall 1, Fall 2, Fall 3, Fall 4 [ 83, 225, 226, 227 ] | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5 [ 83, 225, 226, 227, 228 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Karthik Raveendran [ karthik ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Sprint | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5 [ 83, 225, 226, 227, 228 ] | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6 [ 83, 225, 226, 227, 228, 229 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Karthik Raveendran [ karthik ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Karthik Raveendran [ karthik ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Sprint | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6 [ 83, 225, 226, 227, 228, 229 ] | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6, Fall 7 [ 83, 225, 226, 227, 228, 229, 230 ] |
| Rank | Ranked higher |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Karthik Raveendran [ karthik ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Karthik Raveendran [ karthik ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Karthik Raveendran [ karthik ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Sprint | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6, Fall 7 [ 83, 225, 226, 227, 228, 229, 230 ] | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6, Fall 7, Fall 8 [ 83, 225, 226, 227, 228, 229, 230, 231 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Story Points | 2 | 10 |
| Sprint | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6, Fall 7, Fall 8 [ 83, 225, 226, 227, 228, 229, 230, 231 ] | Fall 1, Fall 2, Fall 3, Fall 4, Fall 5, Fall 6, Fall 7, Fall 8, Fall 9 [ 83, 225, 226, 227, 228, 229, 230, 231, 232 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Karthik Raveendran [ karthik ] | Nowlan Freese [ nfreese ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Assignee | Nowlan Freese [ nfreese ] | Karthik Raveendran [ karthik ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Assignee | Ann Loraine [ aloraine ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Assignee | Ann Loraine [ aloraine ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Fix Version/s | 10.2.0 [ 11100 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |