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  1. IGB
  2. IGBF-4295

Add the ability to include cluster information to SAMtools tags Color by feature

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: 10.2.0
        • Labels:
          None

          Description

          Currently, users can import a file with SAMtool tags values and corresponding color hex codes in two columns. This ticket is about adding functionality where users can add corresponding cluster information (cluster id/name) for each tag value as well.

          For the completion of this task:

          1. Users must be able to import 2-column or 3-column tsv/csv/txt file
          2. Importing 2-column files, SAMtools tag value and color, should work exactly as it does right now.
          3. Anticipate potential user errors while importing and handle it.
          4. Importing 3-column files, includes cluster id, users should be able to choose between:
          • using the feature as it is right now - color by samtools tag values such as cell barcode
          • or, color by cluster ids

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-4375 Fix Filter By window in IGB when user enters many values

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-4376 Fix closing of Color By window when Import window open freezes IGB

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-4377 Fix Color By window opening at top left of screen

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-4378 Fix manually entered clusters filling entire table

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-4379 User entered values in the Color By SAMtags should be auto-checked

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    karthik Karthik Raveendran
                    Reporter:
                    karthik Karthik Raveendran
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                    Dates

                    • Created:
                      Updated:
                      Resolved: